ZFIN ID: ZDB-GENE-030131-726
Gene Name: ubiquitin specific peptidase 1
Gene Symbol: usp1
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: wu:fb43a02, zgc:55962

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cysteine-type endopeptidase activity and thiol-dependent ubiquitin-specific protease activity; predicted to be involved in protein deubiquitination; orthologous to human USP1  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55962]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa40721 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. S4 from Tse et al., 2009
    Observed in:
    DISEASE ASSOCIATED WITH usp1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH usp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein deubiquitination (more)
    Molecular Function cysteine-type endopeptidase activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001394 (1)
  • InterPro:IPR018200 (1)
  • InterPro:IPR028889 (1)
  • InterPro:IPR033815 (1)
  • InterPro:IPR038765 (1)
  • PROSITE:PS00972 (1)
  • PROSITE:PS00973 (1)
  • PROSITE:PS50235 (1)
  • Pfam:PF00443 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA usp1-002 (1) 718
    mRNA usp1-201 (1) 3347
    usp1-203 (1) 541
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM usp1 No data available
    MARKER RELATIONSHIPS
    usp1Contained in: [BAC] CH211-90H23 (1) (order this), CH211-208A5 (1) (order this)
    usp1Encodes: [EST] fb43a02
    [cDNA] MGC:55962 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199579 (1) 3300bp
    Genomic GenBank:CU570976 (1) 130865bp
    Select Tool
    Polypeptide UniProtKB:F1QNF4 (1) 772aa
    Sequence Clusters UniGene:115559 (1)
    Sequence Information (all 14)
    OTHER usp1 GENE PAGES
  • Alliance (1)
  • Gene:322007 (1)
  • VEGA:OTTDARG00000019789 (1)
  • Ensembl(GRCz11):ENSDARG00000056414 (2)
  • ORTHOLOGY for usp1 (Chr: 6)
    CITATIONS (22)