ZFIN ID: ZDB-GENE-030131-7093
Gene Name: SET domain bifurcated histone lysine methyltransferase 2
Gene Symbol: setdb2
Sequence Ontology ID : SO:0000704

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Previous Name: wu:fk80d09

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(Including Attributions)
Location: Ambiguous Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 9 figures from 2 publications
Observed in:
DISEASE ASSOCIATED WITH setdb2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH setdb2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process convergent extension involved in gastrulation (more)
Cellular Component nucleus (more)
Molecular Function histone methyltransferase activity (H3-K9 specific) (more)
GO Terms (all 23)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001214 (1)
  • InterPro:IPR001739 (1)
  • InterPro:IPR007728 (1)
  • InterPro:IPR016177 (1)
  • PROSITE:PS50280 (1)
  • PROSITE:PS50867 (1)
  • Pfam:PF00856 (1)
  • Pfam:PF01429 (1)
  • Pfam:PF05033 (1)
  • EC:2.1.1.43 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM setdb2 No data available
    MARKER RELATIONSHIPS
    setdb2Encodes: [EST] fk80d09
    [cDNA] MGC:77298 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_207058 (1)
    Genomic GenBank:CABZ01090030 (1) 1033bp
    Polypeptide UniProtKB:Q06ZW3 (1) 551aa
    Sequence Clusters UniGene:82071 (1)
    Sequence Information (all 16)
    OTHER setdb2 GENE PAGES
  • Alliance (1)
  • Gene:335153 (1)
  • Ensembl(GRCz11):ENSDARG00000101462 (1)
  • ORTHOLOGY for setdb2 (Ambiguous)
    CITATIONS (22)