Gene

rnf40

ID

ZDB-GENE-030131-6607

Name

ring finger protein 40

Symbol

rnf40 Nomenclature History

Previous Names

si:rp71-1c10.1
wu:fk48a06 (1)
zgc:103763 (1)
zgc:152796

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to have metal ion binding activity and ubiquitin-protein transferase activity. Predicted to be involved in histone monoubiquitination. Predicted to localize to nucleus. Orthologous to human RNF40 (ring finger protein 40).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

Thisse Expression Data

MGC:103763 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rnf40 Human Ortholog

No data available

Associated With rnf40 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017907	Zinc finger, RING-type, conserved site
Domain	IPR001841	Zinc finger, RING-type
Family	IPR013956	E3 ubiquitin ligase Bre1
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type

Domain Details Per Protein

Protein	Length	E3 ubiquitin ligase Bre1	Zinc finger, RING/FYVE/PHD-type	Zinc finger, RING-type	Zinc finger, RING-type, conserved site
UniProtKB:F1QMP3 InterPro	331
UniProtKB:Q08CR1 InterPro	562
UniProtKB:E7F3E1 InterPro	925
UniProtKB:A0A0R4ID58 InterPro	1004
UniProtKB:Q5XJ27 InterPro	331
UniProtKB:F1QXU6 InterPro	1010