ZFIN ID: ZDB-GENE-030131-6151
Gene Name: zgc:77650
Gene Symbol: zgc:77650    Nomenclature History

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Previous Names: fi36f11, wu:fi36f11

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to have GTP binding activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to localize to cytoplasm. Is expressed in notochord and polster. Orthologous to several human genes including ARF5 (ADP ribosylation factor 5).
Genome Resources: Alliance (1),  Gene:334219 (1),  Ensembl(GRCz11):ENSDARG00000113899 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (15 images) from Thisse et al., 2004 [MGC:77650]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13809 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23227 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:77650 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:77650 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process intracellular protein transport (more)
    Cellular Component cytoplasm (more)
    Molecular Function GTP binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:77650-201 (1)    Ensembl 1622
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:77650 No data available
    MARKER RELATIONSHIPS
    zgc:77650 Contained in: [BAC] DKEY-238C7 (1) (order this), DKEYP-1H4 (1)
    zgc:77650 Encodes: [EST] fi36f11
    [cDNA] MGC:77650 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199876 (1) 1646 nt
    Genomic GenBank:BX571879 252198 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q6P5M5 (1) 180 aa
    Sequence Information (all 13)
    ORTHOLOGY for zgc:77650 ( Chr: 18 )
    CITATIONS (17)