ZFIN ID: ZDB-GENE-030131-6070
Gene Name: nipped-B homolog b (Drosophila)
Gene Symbol: nipblb
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: nipbl (1), fc12g03, wu:fc12g03, wu:fi33d08 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 6 figures from 4 publications
Wild-type Stages, Structures: Blastula:512-cell (2.75h-3.0h) to Pharyngula:Prim-25 (36.0h-42.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027180Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa7339 Point Mutation Unknown Nonsynonymous ENU
    sa8848 Point Mutation Unknown Premature Stop ENU
    sa10463 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa17819 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18992 Point Mutation Unknown Premature Stop ENU
    sa30653 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31792 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34952 Point Mutation Unknown Splice Site, Nonsynonymous ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38808 Point Mutation Unknown Splice Site ENU
    sa38809 Point Mutation Unknown Premature Stop ENU
    sa41708 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41709 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41710 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 5 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH nipblb HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Cornelia de Lange syndrome Cornelia de Lange syndrome 1 122470
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process developmental growth (more)
    Cellular Component nucleus (more)
    Molecular Function chromatin binding (more)
    GO Terms (all 20)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011989 (1)
  • InterPro:IPR016024 (1)
  • InterPro:IPR024986 (1)
  • InterPro:IPR026003 (1)
  • InterPro:IPR033031 (1)
  • Pfam:PF12765 (1)
  • Pfam:PF12830 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nipblb-001 (1) 9367
    ncRNA nipblb-002 (1) 753
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nipblb No data available
    MARKER RELATIONSHIPS
    nipblbContained in: [BAC] CH211-135J7 (1) (order this), DKEY-21N12 (1) (order this)
    nipblbEncodes: [EST] fc12g03, fi33d08
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001161447 (1) 9678bp
    Genomic GenBank:AL929053 (1) 142345bp
    Select Tool
    Polypeptide UniProtKB:F1QBY1 (1) 2876aa
    Sequence Clusters UniGene:78039 (1)
    Sequence Information (all 18)
    OTHER nipblb GENE PAGES
  • Alliance (1)
  • Gene:794108 (1)
  • VEGA:OTTDARG00000031185 (1)
  • Ensembl(GRCz10):ENSDARG00000061052 (1)
  • ORTHOLOGY for nipblb (Chr: 10)
    CITATIONS (27)