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ZIRC
ZFIN ID: ZDB-GENE-030131-5971
Gene Name: tumor necrosis factor receptor superfamily, member 21
Gene Symbol: tnfrsf21
Sequence Ontology ID : SO:0001217

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Previous Names: DR6 (2), im:6795346, wu:fa55e01 (1), wu:fb02e11 (1), wu:fc29a09 (1), wu:fi27h08 (1)

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in establishment of endothelial blood-brain barrier and sprouting angiogenesis. Predicted to localize to the integral component of plasma membrane. Is expressed in floor plate; forerunner  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Gastrula:75%-epiboly (8.0h-9.0h) to Pharyngula:Prim-15 (30.0h-36.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23765 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH tnfrsf21 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tnfrsf21 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process establishment of endothelial blood-brain barrier (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 16)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tnfrsf21-201 (1) 4854
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tnfrsf21 No data available
    MARKER RELATIONSHIPS
    tnfrsf21 Contained in: [BAC] CH211-89E5 (1) (order this), CH211-207N9 (1) (order this), DKEY-13I15 (1) (order this)
    tnfrsf21 Contains: [SNP] rs3729041 (1)
    tnfrsf21 Encodes: [EST] fa55e01, fb02e11, fc29a09, fi27h08, IMAGE:6795346
    [cDNA] MGC:162830 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001042688 (1) 2948 bp
    Genomic GenBank:BX842240 (1) 168556 bp
    Select Tool
    Polypeptide UniProtKB:A5D8S6 (1) 637 aa
    Sequence Clusters UniGene:108925 (1)
    Sequence Information (all 30)
    ORTHOLOGY for tnfrsf21 ( Chr: 20 )
    CITATIONS (29)