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ZIRC
ZFIN ID: ZDB-GENE-030131-5784
Gene Name: basonuclin 2
Gene Symbol: bnc2
Sequence Ontology ID : SO:0001217

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Previous Names: bnp, coral, crl, fi18b05, poppy (1), si:dkey-114f6.1, wu:fi18b05

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity and nucleic acid binding activity. Involved in developmental pigmentation. Localizes to the nucleus. Is expressed in several structures, including  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b257 Unknown Unknown Unknown ENU
j10e1 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6591 Point Mutation Unknown Premature Stop ENU
    sa16752 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • utr16e1 Point Mutation Unknown Premature Stop ENU
    Targeting reagents:
    DISEASE ASSOCIATED WITH bnc2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Lower urinary tract obstruction, congenital 618612
    DISEASE ASSOCIATED WITH bnc2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process developmental pigmentation (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR040436 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA bnc2-201 (1) 4758
    bnc2-202 (1) 4621
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM bnc2 No data available
    MARKER RELATIONSHIPS
    bnc2 Contained in: [BAC] DKEY-41L5 (1) (order this), DKEY-111N20 (1) (order this), DKEY-114F6 (1) (order this)
    bnc2 Encodes: [EST] fi18b05
    [cDNA] MGC:175252 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001122755 (1) 4231 bp
    Genomic GenBank:CR812957 (1) 220462 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IKC9 (1) 1268 aa
    Sequence Clusters UniGene:56035 (1)
    Sequence Information (all 30)
    ORTHOLOGY for bnc2 ( Chr: 1 )
    CITATIONS (28)