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ZIRC
ZFIN ID: ZDB-GENE-030131-5736
Gene Name: craniofacial development protein 1
Gene Symbol: cfdp1
Sequence Ontology ID : SO:0000704

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Previous Names: fi15f05, rltpr, si:dkey-6e12.6, wu:fi15f05, zgc:136405

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in bone mineralization and cranial skeletal system development; predicted to localize to the condensed chromosome kinetochore; orthologous to human CFDP1 (craniofacial development protein 1).
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7150861]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 6 (144.0h-168.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13566 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa29037 Point Mutation Unknown Splice Site ENU
    sa32208 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH cfdp1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cfdp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process bone mineralization (more)
    Cellular Component chromosome (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011421 (1)
  • PROSITE:PS51279 (1)
  • Pfam:PF07572 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cfdp1-201 (1) 1741
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cfdp1 No data available
    MARKER RELATIONSHIPS
    cfdp1Contained in: [BAC] DKEY-6E12 (1) (order this)
    cfdp1Encodes: [EST] fi15f05, IMAGE:7150861 (1) (order this)
    [cDNA] MGC:136405 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001100035 (1) 1741bp
    Genomic GenBank:BX088593 (1) 251217bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5BKW0 (1) 354aa
    Sequence Clusters UniGene:141547 (1)
    Sequence Information (all 24)
    ORTHOLOGY for cfdp1 (Chr: 18)
    CITATIONS (17)