ZFIN ID: ZDB-GENE-030131-5735
Gene Name: TNF receptor-associated factor 6
Gene Symbol: traf6

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Previous Names: fi15f02, wu:fi15f02, zgc:63704

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 5 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63704]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  brain, floor plate, gill, heart (all 9) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa151 Point Mutation Unknown Premature Stop ENU
sa244 Point Mutation Unknown Premature Stop ENU
Targeting reagents: MO1-traf6 (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH traf6 HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process positive regulation of transcription, DNA-templated (more)
Cellular Component cytoplasm (more)
Molecular Function ubiquitin-protein transferase activity (more)
GO Terms (all 14)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001293 (1)
  • InterPro:IPR001841 (1)
  • InterPro:IPR002083 (1)
  • InterPro:IPR008974 (1)
  • InterPro:IPR012227 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR013323 (1)
  • InterPro:IPR017907 (1)
  • InterPro:IPR027139 (1)
  • PROSITE:PS00518 (1)
  • PROSITE:PS50089 (1)
  • PROSITE:PS50144 (1)
  • PROSITE:PS50145 (1)
  • Pfam:PF02176 (1)
  • EC:2.3.2.27 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA traf6-001 (1) 4707
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM traf6 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    traf6Contained in: [BAC] DKEY-56P7 (1) (order this)
    traf6Encodes: [EST] fi15f02
    [cDNA] MGC:63704 (1) (order this), MGC:198210 (1) (order this), MGC:198214 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001044752 (1) 1733bp
    Genomic GenBank:AL929208 (1) 189608bp
    Select Tool
    Polypeptide UniProtKB:Q6IWL4 (1) 542aa
    Sequence Clusters UniGene:74618 (1)
    Sequence Information (all 23)
    OTHER traf6 GENE PAGES
  • Gene:554561 (1)
  • VEGA:OTTDARG00000011681 (1)
  • Ensembl(GRCz10):ENSDARG00000028058 (1)
  • ORTHOLOGY for traf6 (Chr: 7)
    CITATIONS (36)