ZFIN ID: ZDB-GENE-030131-5253
Gene Name: zgc:162936
Gene Symbol: zgc:162936    Nomenclature History

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Previous Names: fa20c11, wu:fa20c11

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus.
Genome Resources: Alliance (1),  Gene:100005727 (1),  Ensembl(GRCz11):ENSDARG00000069957 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa744 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:162936 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:162936 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription by RNA polymerase II (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:162936-202 (1)    Ensembl 1386
    Browsers: UCSCEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:162936 No data available
    MARKER RELATIONSHIPS
    zgc:162936 Contained in: [BAC] DKEY-77F5 (1) (order this)
    zgc:162936 Encodes: [EST] fa20c11
    [cDNA] MGC:162936 (1), MGC:174948 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001366639 (1)
    Genomic GenBank:BX000999 (1) 200989 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IWZ7 (1) 426 aa
    Sequence Information (all 22)
    ORTHOLOGY for zgc:162936 ( Chr: 15 )
    CITATIONS (15)