| ZFIN ID: ZDB-GENE-030131-5253 |
| Gene Name: | zgc:162936 | |||||||||||||
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| Gene Symbol: | zgc:162936 Nomenclature History |
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Attributions
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| Previous Names: | fa20c11, wu:fa20c11 | |||||||||||||
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| Gene Type: | protein_coding_gene | |||||||||||||
| Location: | Chr: 15 Mapping Details/Browsers | |||||||||||||
| Description: | Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. | |||||||||||||
| Genome Resources: | Alliance (1), Gene:100005727 (1), Ensembl(GRCz11):ENSDARG00000069957 (1) | |||||||||||||
Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.
MUTATIONS AND SEQUENCE TARGETING REAGENTS
| Allele | Type | Localization | Consequence | Mutagen | Suppliers |
|---|---|---|---|---|---|
| sa744 | Point Mutation | Unknown | Splice Site | ENU |
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GENE ONTOLOGY
| Ontology | GO Term |
|---|---|
| Biological Process | regulation of transcription by RNA polymerase II (more) |
| Cellular Component | nucleus (more) |
| Molecular Function | metal ion binding (more) |
| Type | Name | Length (nt) | Analysis | |
|---|---|---|---|---|
| mRNA |
zgc:162936-202
(1)
|
1386 |
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| Browsers: UCSC, Ensembl, ZFIN |
INTERACTIONS AND PATHWAYS
ANTIBODIES
No data available
PLASMIDS
No data available
CONSTRUCTS WITH SEQUENCES FROM zgc:162936
No data available
MARKER RELATIONSHIPS
| zgc:162936 Contained in: | [BAC] DKEY-77F5 (1) (order this) |
| zgc:162936 Encodes: |
[EST]
fa20c11
[cDNA] MGC:162936 (1), MGC:174948 (1) |
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_001366639 (1) |
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| Genomic | GenBank:BX000999 (1) | 200989 nt | Blast at MegaBLAST |
| Polypeptide | UniProtKB:A0A0R4IWZ7 (1) | 426 aa |
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ORTHOLOGY for zgc:162936 (
Chr:
15
)
CITATIONS (15)