ZFIN ID: ZDB-GENE-030131-5206
Gene Name: calpain, small subunit 1 b
Gene Symbol: capns1b    Nomenclature History

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Previous Names: cb536 (1), fa18a08, wu:fa18a08, zgc:171735

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Is expressed in several structures, including digestive system; epidermis; nervous system; pectoral fin; and periderm. Orthologous to several human genes including CAPNS1 (calpain small subunit 1).
Genome Resources: Alliance (1),  Gene:560033 (1),  Ensembl(GRCz11):ENSDARG00000013804 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35906 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH capns1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH capns1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function calcium ion binding (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA capns1b-201 (1)    Ensembl 1345
    capns1b-202 (1)    Ensembl 971
    capns1b-204 (1)    Ensembl 692
    ncRNA capns1b-004 (1)    Ensembl 849
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM capns1b No data available
    MARKER RELATIONSHIPS
    capns1b Contained in: [BAC] CH211-137A8 (1)
    capns1b Encodes: [EST] cb536 (1) (order this), fa18a08
    [cDNA] MGC:171735 (1), MGC:193580 (1), MGC:193610 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001109706 (1) 1317 nt
    Genomic GenBank:BX004776 (1) 195462 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R8PV64 (1) 242 aa
    Sequence Information (all 24)
    ORTHOLOGY for capns1b ( Chr: 15 )
    CITATIONS (19)