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ZIRC
ZFIN ID: ZDB-GENE-030131-4928
Gene Name: PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
Gene Symbol: pif1
Sequence Ontology ID : SO:0000704

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Previous Names: cb934 (1), fe11d03, PIF1 homolog (1), wu:fe11d03, zgc:56161 (1)

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have 5'-3' DNA helicase activity. Predicted to be involved in DNA duplex unwinding and DNA replication. Predicted to localize to the replication fork. Orthologous to human PIF1 (PIF1  ...
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2001 [cb934]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pif1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH pif1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular response to DNA damage stimulus (more)
Cellular Component mitochondrion (more)
Molecular Function ATP binding (more)
GO Terms (all 21)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003593 (1)
  • InterPro:IPR010285 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF05970 (1)
  • EC:3.6.4.12 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA pif1-002 (1) 954
    mRNA pif1-201 (1) 2455
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pif1 No data available
    MARKER RELATIONSHIPS
    pif1Contained in: [BAC] CH211-234E14 (1) (order this)
    pif1Encodes: [EST] cb934 (1) (order this), fe11d03
    [cDNA] MGC:56161 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_198807 (1) 2483bp
    Genomic GenBank:BX296556 (1) 181230bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QPL9 (1) 647aa
    Sequence Clusters UniGene:80157 (1)
    Sequence Information (all 15)
    ORTHOLOGY for pif1 (Chr: 2)
    CITATIONS (30)