ZFIN ID: ZDB-GENE-030131-4334
Gene Name: activating transcription factor 1
Gene Symbol: atf1
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fc92c07, zgc:64099

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:64099]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH atf1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH atf1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription by RNA polymerase II (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001630 (1)
  • InterPro:IPR003102 (1)
  • InterPro:IPR004827 (1)
  • InterPro:IPR029825 (1)
  • PROSITE:PS00036 (1)
  • PROSITE:PS50217 (1)
  • PROSITE:PS50953 (1)
  • Pfam:PF00170 (1)
  • Pfam:PF02173 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atf1-001 (1) 2140
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atf1 No data available
    MARKER RELATIONSHIPS
    atf1Contained in: [BAC] CH73-187P21 (1) (order this), CH211-173N18 (1) (order this)
    atf1Encodes: [EST] fc92c07
    [cDNA] MGC:64099 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199723 (1) 2077bp
    Genomic GenBank:CR388364 (1) 95553bp
    Select Tool
    Polypeptide UniProtKB:Q7T351 (1) 304aa
    Sequence Clusters UniGene:155563 (1)
    Sequence Information (all 11)
    OTHER atf1 GENE PAGES
  • Alliance (1)
  • Gene:325609 (1)
  • VEGA:OTTDARG00000027223 (1)
  • ORTHOLOGY for atf1 (Chr: 6)
    CITATIONS (16)