ZFIN ID: ZDB-GENE-030131-3406
Gene Name: replication timing regulatory factor 1
Gene Symbol: rif1
Sequence Ontology ID : SO:0000704

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Previous Names: fc38c03, si:dkey-89p3.2, wu:fc38c03

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in telomere maintenance; predicted to localize to the nucleus; orthologous to human RIF1 (replication timing regulatory factor 1).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu1103]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6113 Point Mutation Unknown Splice Site ENU
sa7629 Point Mutation Unknown Missense ENU
sa10257 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rif1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rif1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR016024 (1)
  • InterPro:IPR022031 (1)
  • InterPro:IPR028566 (1)
  • Pfam:PF12231 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rif1-203 (1) 7574
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rif1 No data available
    MARKER RELATIONSHIPS
    rif1Contained in: [BAC] DKEY-16P7 (1) (order this), DKEY-89P3 (1) (order this)
    rif1Encodes: [EST] eu1103 (1), fc38c03
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080806 (1) 7313bp
    Genomic GenBank:CR391905 (1) 221511bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8Q220 (1) 2400aa
    Sequence Clusters UniGene:78589 (1)
    Sequence Information (all 20)
    OTHER rif1 GENE PAGES
  • Alliance (1)
  • Gene:567001 (1)
  • VEGA:OTTDARG00000023663 (1)
  • ORTHOLOGY for rif1 (Chr: 9)
    CITATIONS (12)