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ZIRC
ZFIN ID: ZDB-GENE-030131-3246
Gene Name: ataxin 2-like
Gene Symbol: atxn2l    Nomenclature History

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Previous Names: wu:fc31f08, wu:fi19h05, zgc:66471

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to be involved in regulation of cytoplasmic mRNA processing body assembly and stress granule assembly. Predicted to localize to the cytoplasmic stress granule. Orthologous to human ATXN2L (ataxin 2 like).
Genome Resources: Alliance (1),  Gene:324525 (1),  Ensembl(GRCz11):ENSDARG00000011597 (1)
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la010371Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la011561Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1077 Point Mutation Unknown Splice Site ENU
    sa19965 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25243 Point Mutation Unknown Splice Site ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atxn2l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atxn2l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of cytoplasmic mRNA processing body assembly (more)
    Cellular Component cytoplasmic stress granule (more)
    Molecular Function RNA binding (more)
    GO Terms (all 4)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA atxn2l-201 (1)    Ensembl 3681
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atxn2l No data available
    MARKER RELATIONSHIPS
    atxn2l Contained in: [BAC] CH211-66P13 (1) (order this)
    atxn2l Encodes: [EST] fc31f08, fi19h05 (1)
    [cDNA] MGC:66471 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212684 (1) 3570 bp
    Genomic GenBank:BX784026 (1) 162371 bp
    Select Tool
    Polypeptide UniProtKB:F1QA42 (1) 1004 aa
    Sequence Clusters UniGene:161684 (1)
    Sequence Information (all 23)
    ORTHOLOGY for atxn2l ( Chr: 3 )
    CITATIONS (18)