ZFIN ID: ZDB-GENE-030131-3246
Gene Name: ataxin 2-like
Gene Symbol: atxn2l
Previous Names: wu:fc31f08, wu:fi19h05, zgc:66471
Location: Chr: 3   Details
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: la010371Tg, la011561Tg, sa19965
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of cytoplasmic mRNA processing body assembly (more)
Cellular Component cytoplasmic stress granule (more)
Molecular Function poly(A) RNA binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009604 (1)
  • InterPro:IPR009818 (1)
  • InterPro:IPR025852 (1)
  • Pfam:PF06741 (1)
  • Pfam:PF07145 (1)
  • Pfam:PF14438 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atxn2l-001 (1) 3681
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atxn2l No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atxn2l Contained in: [BAC] CH211-66P13 (1) (order this)
    atxn2l Encodes: [EST] fc31f08, fi19h05 (1)
    [cDNA] MGC:66471 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212684 (1) 3570 bp
    Genomic GenBank:BX784026 (1) 162371 bp
    Select Tool
    Polypeptide UniProtKB:F1QA42 (1) 1004 aa
    Sequence Clusters UniGene:78788 (1)
    Sequence Information (all 19)
    OTHER atxn2l GENE PAGES
  • Gene:324525 (1)
  • VEGA:OTTDARG00000019689 (1)
  • Ensembl(Zv9):ENSDARG00000011597 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish atxn2l 3  
    Human ATXN2L 16 (16p11)
  • OMIM:607931
  • Gene:11273
  • Mouse Atxn2l 7 ( 69.09 cM)
  • MGI:2446242
  • Gene:233871
  • Orthology Details
    CITATIONS (15)