ZFIN ID: ZDB-GENE-030131-3200
Gene Name: bromodomain PHD finger transcription factor
Gene Symbol: bptf    Nomenclature History

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Previous Names: fc30e02, fc32a05, wu:fb71f11, wu:fc30e02, wu:fc32a05

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including cranial skeletal system development; neural plate anterior/posterior regionalization; and nucleosome positioning. Predicted to localize to NURF complex. Is expressed in head. Orthologous to human BPTF (bromodomain PHD finger transcription factor).
Genome Resources: Alliance (1),  Gene:324479 (1),  Ensembl(GRCz11):ENSDARG00000077361 (2)
GENE EXPRESSION
All Expression Data: Fig. 1 from Ma et al., 2015
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Pharyngula:Prim-15 (30.0h-36.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
DISEASE ASSOCIATED WITH bptf HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Neurodevelopmental disorder with dysmorphic facies and distal limb anomalies 617755
DISEASE ASSOCIATED WITH bptf VIA EXPERIMENTAL MODELS No data available
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA bptf-202 (1)    Ensembl 10794
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES
Name Type Isotype Host Organism Assay Source Publications
Ab1-bptf polyclonal Rabbit WB 1
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM bptf No data available
MARKER RELATIONSHIPS
bptf Contained in: [BAC] DKEY-226A5 (1) (order this)
bptf Encodes: [EST] fb71f11, fc30e02, fc32a05
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:XM_005171627 (1) 9737 nt
Genomic GenBank:BX085195 (1) 227111 nt Blast at MegaBLAST
Polypeptide UniProtKB:E7F366 (1) 2899 aa
Sequence Information (all 31)
ORTHOLOGY for bptf ( Chr: 3 )
CITATIONS (18)