ZFIN ID: ZDB-GENE-030131-3197
Gene Name: zinc finger, matrin-type 2
Gene Symbol: zmat2
Sequence Ontology ID : SO:0000704

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Previous Names: fc30d10, flj31121 (1), wu:fc30d10

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:113931]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi526bTg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-zmat2 (1)
    PHENOTYPE
    Data: 2 figures from 2 publications
    Observed in: brain, central nervous system, eye, gut (all 8) expand
    DISEASE ASSOCIATED WITH zmat2 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mRNA splicing, via spliceosome (more)
    Cellular Component U4/U6 x U5 tri-snRNP complex (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003604 (1)
  • InterPro:IPR013087 (1)
  • InterPro:IPR022755 (1)
  • Pfam:PF12171 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zmat2-001 (1) 1196
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zmat2 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    zmat2Contained in: [BAC] DKEY-8F23 (1) (order this)
    zmat2Encodes: [EST] fc30d10
    [cDNA] MGC:113931 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212681 (1) 1123bp
    Genomic GenBank:CT027639 (1) 33553bp
    Select Tool
    Polypeptide UniProtKB:Q4QRF9 (1) 198aa
    Sequence Clusters UniGene:3190 (1)
    Sequence Information (all 13)
    OTHER zmat2 GENE PAGES
  • Gene:324476 (1)
  • VEGA:OTTDARG00000028265 (1)
  • Ensembl(GRCz10):ENSDARG00000004956 (1)
  • ORTHOLOGY for zmat2 (Chr: 21)
    CITATIONS (22)