ZFIN ID: ZDB-GENE-030131-3197
Gene Name: zinc finger, matrin-type 2
Gene Symbol: zmat2
Sequence Ontology ID : SO:0000704

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Previous Names: fc30d10, flj31121 (1), wu:fc30d10

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:113931]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi526bTg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 2 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH zmat2 HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mRNA splicing, via spliceosome (more)
    Cellular Component U4/U6 x U5 tri-snRNP complex (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003604 (1)
  • InterPro:IPR022755 (1)
  • InterPro:IPR036236 (1)
  • Pfam:PF12171 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zmat2-001 (1) 1196
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zmat2 No data available
    MARKER RELATIONSHIPS
    zmat2Contained in: [BAC] DKEY-8F23 (1) (order this)
    zmat2Encodes: [EST] fc30d10
    [cDNA] MGC:113931 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212681 (1) 1123bp
    Genomic GenBank:CT027639 (1) 33553bp
    Select Tool
    Polypeptide UniProtKB:Q4QRF9 (1) 198aa
    Sequence Clusters UniGene:3190 (1)
    Sequence Information (all 14)
    OTHER zmat2 GENE PAGES
  • Alliance (1)
  • Gene:324476 (1)
  • VEGA:OTTDARG00000028265 (1)
  • Ensembl(GRCz10):ENSDARG00000004956 (1)
  • ORTHOLOGY for zmat2 (Chr: 21)
    CITATIONS (26)