ZFIN ID: ZDB-GENE-030131-2829
Gene Name: sp1 transcription factor
Gene Symbol: sp1
Sequence Ontology ID : SO:0000704

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Previous Names: fc18h09, wu:fc18h09

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding activity transcription factor activity, RNA polymerase II-specific; predicted to be involved in regulation of transcription by RNA polymerase II; predicted to localize  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:85950]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21820 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21821 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sp1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription by RNA polymerase II (more)
    Cellular Component nucleus (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR030449 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sp1-001 (1) 2595
    sp1-002 (1) 628
    sp1-003 (1) 810
    sp1-004 (1) 317
    sp1-005 (1) 648
    sp1-006 (1) 901
    sp1-007 (1) 628
    sp1-008 (1) 810
    sp1-009 (1) 649
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sp1 No data available
    MARKER RELATIONSHIPS
    sp1Contained in: [Fosmid] ZFOS-2602E3 (1)
    sp1Encodes: [EST] fc18h09
    [cDNA] MGC:85950 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212662 (1) 2262bp
    Genomic GenBank:FP326665 (1) 38245bp
    Select Tool
    Polypeptide UniProtKB:F1QW97 (1) 594aa
    Sequence Clusters UniGene:78488 (1)
    Sequence Information (all 28)
    OTHER sp1 GENE PAGES
  • Alliance (1)
  • Gene:324109 (1)
  • VEGA:OTTDARG00000040929 (1)
  • Ensembl(GRCz11):ENSDARG00000088347 (2)
  • ORTHOLOGY for sp1 (Chr: 11)
    CITATIONS (31)