ZFIN ID: ZDB-GENE-030131-2773
Gene Name: tripartite motif containing 33
Gene Symbol: trim33
Sequence Ontology ID : SO:0000704

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Previous Names: mon, cb1085 (1), id:ibd2175, moonshine, tif1 gamma (2), unm t30813, unm_t30813, vampire (1), wu:fc17f10, zgc:136680

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity, transferase activity, and zinc ion binding activity; involved in several processes, including animal organ development, developmental pigmentation, and  ...
GENE EXPRESSION
All Expression Data: 13 figures from 5 publications
Directly Submitted Expression Data: 4 figures (5 images) from Kudoh et al., 2001 [ibd2175]
  6 figures (8 images) from Thisse et al., 2001 [cb1085]
Wild-type Stages, Structures: Blastula:256-cell (2.5h-2.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026325Tg Transgenic Insertion Unknown Unknown DNA
m62 Unknown Unknown Unknown ENU
m262 Point Mutation Unknown Premature Stop ENU
sa1735 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa2432 Point Mutation Unknown Premature Stop ENU
    sa15516 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16614 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa27135 Point Mutation Unknown Premature Stop ENU
    sa27136 Point Mutation Unknown Premature Stop ENU
    t30813 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tb222b Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tc239b Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tc246b Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • te345 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tg234 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • trim33_unspecified Unspecified Unknown Unknown
    tu244b Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • ty57 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tz276 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 31 figures from 8 publications
    Observed in:
    DISEASE ASSOCIATED WITH trim33 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH trim33 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process erythrocyte differentiation (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 17)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000315 (1)
  • InterPro:IPR001487 (1)
  • InterPro:IPR001841 (1)
  • InterPro:IPR001965 (1)
  • InterPro:IPR003649 (1)
  • InterPro:IPR011011 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR017907 (1)
  • InterPro:IPR019786 (1)
  • InterPro:IPR019787 (1)
  • InterPro:IPR036427 (1)
  • PROSITE:PS00518 (1)
  • PROSITE:PS01359 (1)
  • PROSITE:PS50014 (1)
  • PROSITE:PS50016 (1)
  • PROSITE:PS50089 (1)
  • PROSITE:PS50119 (1)
  • Pfam:PF00439 (1)
  • Pfam:PF00628 (1)
  • Pfam:PF00643 (1)
  • EC:2.3.2.27 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA trim33-201 (1) 4048
    trim33-202 (1) 819
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM trim33
    MARKER RELATIONSHIPS
    trim33Contained in: [BAC] DKEYP-46C9 (1)
    trim33Encodes: [EST] cb1085 (1) (order this), fc17f10, ibd2175 (order this)
    [cDNA] MGC:136680 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002871 (1) 3957bp
    Genomic GenBank:BX321886 (1) 168093bp
    Select Tool
    Polypeptide UniProtKB:B0S5U2 (1) 1176aa
    Sequence Clusters UniGene:80165 (1)
    Sequence Information (all 21)
    OTHER trim33 GENE PAGES
  • Alliance (1)
  • Gene:324053 (1)
  • VEGA:OTTDARG00000020092 (1)
  • Ensembl(GRCz11):ENSDARG00000016181 (2)
  • ORTHOLOGY for trim33 (Chr: 8)
    CITATIONS (61)