ZFIN ID: ZDB-GENE-030131-2360
Gene Name: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
Gene Symbol: galnt1
Sequence Ontology ID : SO:0000704

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Previous Names: fc05g08, si:ch211-194b7.3, wu:fc05g08 (1)

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have carbohydrate binding activity and transferase activity, transferring glycosyl groups; predicted to be involved in protein glycosylation; predicted to localize to the Golgi  ...
GENE EXPRESSION
All Expression Data: Fig. 2 from Nakayama et al., 2014
Wild-type Stages, Structures: Blastula:1k-cell (3.0h-3.33h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la010056Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019675Tg Transgenic Insertion Unknown Unknown DNA
    sa32092 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH galnt1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH galnt1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein glycosylation (more)
    Cellular Component Golgi apparatus (more)
    Molecular Function carbohydrate binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000772 (1)
  • InterPro:IPR001173 (1)
  • InterPro:IPR029044 (1)
  • InterPro:IPR035992 (1)
  • PROSITE:PS50231 (1)
  • Pfam:PF00535 (1)
  • Pfam:PF00652 (1)
  • EC:2.4.1.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA galnt1-202 (1) 4221
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM galnt1 No data available
    MARKER RELATIONSHIPS
    galnt1Contained in: [BAC] CH211-194B7 (1) (order this), CH211-243D12 (1) (order this)
    galnt1Encodes: [EST] fc05g08
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009292369 (1)
    Genomic GenBank:CR391952 (1) 159502bp
    Select Tool
    Polypeptide UniProtKB:E7FDA0 (1) 557aa
    Sequence Clusters UniGene:78417 (1)
    Sequence Information (all 25)
    OTHER galnt1 GENE PAGES
  • Alliance (1)
  • Gene:559073 (1)
  • VEGA:OTTDARG00000033321 (1)
  • Ensembl(GRCz11):ENSDARG00000061335 (2)
  • ORTHOLOGY for galnt1 (Chr: 16)
    CITATIONS (20)