ZFIN ID: ZDB-GENE-030131-2360
Gene Name: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
Gene Symbol: galnt1    Nomenclature History

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Previous Names: fc05g08, si:ch211-194b7.3, wu:fc05g08 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 16 Mapping Details/Browsers
Description: Predicted to have carbohydrate binding activity and transferase activity, transferring glycosyl groups. Predicted to be involved in protein glycosylation. Predicted to localize to Golgi apparatus. Orthologous to human GALNT1 (polypeptide N-acetylgalactosaminyltransferase 1).
Genome Resources: Alliance (1),  Gene:559073 (1),  Ensembl(GRCz11):ENSDARG00000061335 (2)
GENE EXPRESSION
All Expression Data: Fig. 2 from Nakayama et al., 2014
Wild-type Stages, Structures: Blastula:1k-cell (3.0h-3.33h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la010056Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019675Tg Transgenic Insertion Unknown Unknown DNA
    sa32092 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH galnt1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH galnt1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein glycosylation (more)
    Cellular Component Golgi apparatus (more)
    Molecular Function carbohydrate binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA galnt1-202 (1)    Ensembl 4221
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM galnt1 No data available
    MARKER RELATIONSHIPS
    galnt1 Contained in: [BAC] CH211-194B7 (1), CH211-243D12 (1)
    galnt1 Encodes: [EST] fc05g08
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_009292369 (1)
    Genomic GenBank:CR391952 (1) 159502 nt
    Select Tool
    Polypeptide UniProtKB:E7FDA0 (1) 557 aa
    Sequence Information (all 24)
    ORTHOLOGY for galnt1 ( Chr: 16 )
    CITATIONS (23)