ZFIN ID: ZDB-GENE-030131-2165
Gene Name: nuclear transcription factor Y, gamma
Gene Symbol: nfyc
Sequence Ontology ID : SO:0000704

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Previous Names: fb98f01, wu:fb98f01, zgc:55514

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to RNA polymerase II proximal promoter sequence-specific DNA binding activity; involved in retina development in camera-type eye; predicted to localize to the CCAAT-binding  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55514]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Juvenile:Days 30-44 (30d-45d, 10 mm, adult fins/pigment)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi962Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hi2019Tg Transgenic Insertion Intron 1 Unknown DNA
    PHENOTYPE
    Data: 3 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH nfyc HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nfyc VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process retina development in camera-type eye (more)
    Cellular Component CCAAT-binding factor complex (more)
    Molecular Function DNA binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003958 (1)
  • InterPro:IPR009072 (1)
  • InterPro:IPR027170 (1)
  • Pfam:PF00808 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nfyc-001 (1) 477
    nfyc-201 (1) 389
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nfyc No data available
    MARKER RELATIONSHIPS
    nfycContained in: [BAC] CH211-13C6 (1) (order this), CH211-151B13 (1) (order this)
    nfycEncodes: [EST] fb98f01
    [cDNA] MGC:55514 (1) (order this), MGC:77311 (1) (order this), MGC:173933 (1) (order this), MGC:191356 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199639 (1) 2190bp
    Genomic GenBank:BX957244 (1) 162321bp
    Select Tool
    Polypeptide UniProtKB:Q7ZVY3 (1) 360aa
    Sequence Clusters UniGene:157 (1)
    Sequence Information (all 50)
    OTHER nfyc GENE PAGES
  • Alliance (1)
  • Gene:323445 (1)
  • VEGA:OTTDARG00000015635 (1)
  • Ensembl(GRCz11):ENSDARG00000070151 (2)
  • ORTHOLOGY for nfyc (Chr: 19)
    CITATIONS (25)