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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-2074
Gene Name: pumilio RNA-binding family member 1
Gene Symbol: pum1
Sequence Ontology ID : SO:0001217

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Previous Names: fb96a03, si:ch211-285e16.1, wu:fb96a03, wu:fb96a08, zgc:63671

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity. Human ortholog(s) of this gene implicated in hereditary ataxia. Orthologous to human PUM1 (pumilio RNA binding family member 1).
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020851Tg Transgenic Insertion Unknown Unknown DNA
sa7463 Point Mutation Unknown Missense ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pum1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Spinocerebellar ataxia 47 617931
DISEASE ASSOCIATED WITH pum1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process biological_process (more)
Cellular Component cellular_component (more)
Molecular Function RNA binding (more)
GO Terms (all 3)
TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA pum1-002 (1) 721
pum1-003 (1) 660
mRNA pum1-203 (1) 3228
pum1-204 (1) 399
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIES
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pum1 No data available
MARKER RELATIONSHIPS
pum1 Contained in: [BAC] CH211-285E16 (1) (order this)
pum1 Encodes: [EST] fb96a03
[cDNA] MGC:63671 (1) (order this)
pum1 Has Artifact: [EST] fb96a08
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001277119 (1)
Genomic GenBank:CU207343 (1) 166155 bp
Select Tool
Polypeptide UniProtKB:A0A0R4IWL6 (1) 1152 aa
Sequence Clusters UniGene:155501 (1)
Sequence Information (all 26)
ORTHOLOGY for pum1 ( Chr: 19 )
CITATIONS (23)