ZFIN ID: ZDB-GENE-030131-2074
Gene Name: pumilio RNA-binding family member 1
Gene Symbol: pum1
Sequence Ontology ID : SO:0000704

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Previous Names: fb96a03, si:ch211-285e16.1, wu:fb96a03, wu:fb96a08, zgc:63671

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020851Tg Transgenic Insertion Unknown Unknown DNA
sa7463 Point Mutation Unknown Missense ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pum1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Spinocerebellar ataxia 47 617931
DISEASE ASSOCIATED WITH pum1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process biological_process (more)
Cellular Component cellular_component (more)
Molecular Function RNA binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001313 (1)
  • InterPro:IPR011989 (1)
  • InterPro:IPR016024 (1)
  • InterPro:IPR033133 (1)
  • InterPro:IPR033712 (1)
  • PROSITE:PS50302 (1)
  • PROSITE:PS50303 (1)
  • Pfam:PF00806 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pum1-001 (1) 3228
    ncRNA pum1-002 (1) 721
    pum1-003 (1) 660
    mRNA pum1-004 (1) 399
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pum1 No data available
    MARKER RELATIONSHIPS
    pum1Contained in: [BAC] CH211-285E16 (1) (order this)
    pum1Encodes: [EST] fb96a03
    [cDNA] MGC:63671 (1) (order this)
    pum1Has Artifact: [EST] fb96a08
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001277119 (1)
    Genomic GenBank:CU207343 (1) 166155bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IWL6 (1) 1152aa
    Sequence Clusters UniGene:155501 (1)
    Sequence Information (all 26)
    OTHER pum1 GENE PAGES
  • Alliance (1)
  • Gene:394176 (1)
  • VEGA:OTTDARG00000026693 (1)
  • Ensembl(GRCz11):ENSDARG00000099256 (1)
  • ORTHOLOGY for pum1 (Chr: 19)
    CITATIONS (22)