ZFIN ID: ZDB-GENE-030131-2032
Gene Name: high density lipoprotein binding protein a
Gene Symbol: hdlbpa    Nomenclature History

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Previous Names: HBP (1), hdlbp, cb591 (1), cb811 (1), wu:fb36d01, wu:fb94h08, wu:fc23d06, wu:fc75h07

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Involved in cellular response to estrogen stimulus. Is expressed in several structures, including alar plate midbrain region; digestive system; eye; immature eye; and pectoral fin. Orthologous to human HDLBP (high density lipoprotein binding protein).
Genome Resources: Alliance (1),  Gene:794178 (1),  Ensembl(GRCz11):ENSDARG00000009830 (2)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH hdlbpa HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH hdlbpa VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular response to estrogen stimulus (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR004087 K Homology domain
Domain IPR004088 K Homology domain, type 1
Homologous_superfamily IPR036612 K Homology domain, type 1 superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA hdlbpa-201 (1)    Ensembl 5109
hdlbpa-203 (1)    Ensembl 1495
ncRNA hdlbpa-004 (1)    Ensembl 823
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM hdlbpa No data available
MARKER RELATIONSHIPS
hdlbpa Contained in: [BAC] CH211-87O21 (1)
hdlbpa Encodes: [EST] cb591 (1), cb811 (1) (order this), fb36d01 (1), fb92e10 (1) (order this), fb94h08, fc23d06 (1), fc75h07 (1), IMAGE:7140982 (1)
[cDNA] MGC:55613 (1), MGC:174065 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_201474 (1) 5124 bp
Genomic GenBank:BX957353 (1) 186825 bp
Select Tool
Polypeptide UniProtKB:F1R9Y8 (1) 1272 aa
Sequence Information (all 31)
ORTHOLOGY for hdlbpa ( Chr: 6 )
CITATIONS (27)