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ZIRC
ZFIN ID: ZDB-GENE-030131-1927
Gene Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
Gene Symbol: ddx41
Sequence Ontology ID : SO:0000704

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Previous Name: wu:fb92e02

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(Including Attributions)
Location: Ambiguous Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ATP binding activity and nucleic acid binding activity. Involved in NIK/NF-kappaB signaling; innate immune response; and response to virus. Localizes to the cytoplasm and nucleus.  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55896]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14887 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH ddx41 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    {Myeloproliferative/lymphoproliferative neoplasms, familial (multiple types), susceptibility to} 616871
    DISEASE ASSOCIATED WITH ddx41 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process NIK/NF-kappaB signaling (more)
    Cellular Component cytoplasm (more)
    Molecular Function ATP binding (more)
    GO Terms (all 14)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ddx41-001 (1) 407
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ddx41 No data available
    MARKER RELATIONSHIPS
    ddx41Encodes: [EST] fb92e02
    [cDNA] MGC:55896 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201045 (1) 2039bp
    Genomic GenBank:CABZ01074912 (1) 1915bp
    Polypeptide UniProtKB:A0A2R8QHE6 (1) 326aa
    Sequence Clusters UniGene:122870 (1)
    Sequence Information (all 17)
    ORTHOLOGY for ddx41 (Ambiguous)
    CITATIONS (20)