ZFIN ID: ZDB-GENE-030131-1577
Gene Name: prominin 1a
Gene Symbol: prom1a
Sequence Ontology ID : SO:0000704

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Previous Names: prom1, proml1, fb75c01, wu:fb75c01

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 11 figures from 3 publications
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la019069Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019070Tg Transgenic Insertion Unknown Unknown DNA
    sa2762 Point Mutation Unknown Splice Site ENU
    sa5611 Point Mutation Unknown Splice Site ENU
    sa6357 Point Mutation Unknown Splice Site ENU
    sa11176 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24967 Point Mutation Unknown Splice Site ENU
    sa35758 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35759 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42449 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH prom1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    cone-rod dystrophy 12 Cone-rod dystrophy 12 612657
    retinitis pigmentosa 41 Retinitis pigmentosa 41 612095
    Stargardt disease Stargardt disease 4 603786
    Macular dystrophy, retinal, 2 608051
    DISEASE ASSOCIATED WITH prom1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component endoplasmic reticulum (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR008795 (1)
  • Pfam:PF05478 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA prom1a-001 (1) 5946
    ncRNA prom1a-002 (1) 516
    mRNA prom1a-003 (1) 2948
    ncRNA prom1a-004 (1) 2670
    mRNA prom1a-005 (1) 2972
    aberrant processed transcript prom1a-006 (1) 3069
    prom1a-007 (1) 3051
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM prom1a No data available
    MARKER RELATIONSHIPS
    prom1aContained in: [BAC] CH211-186M20 (1) (order this), DKEY-13A3 (1) (order this)
    prom1aEncodes: [EST] fb75c01
    [cDNA] MGC:194953 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001115143 (1) 2508bp
    Genomic GenBank:BX004823 (1) 197683bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IXE4 (1) 865aa
    Sequence Clusters UniGene:27185 (1)
    Sequence Information (all 60)
    OTHER prom1a GENE PAGES
  • Alliance (1)
  • Gene:322857 (1)
  • VEGA:OTTDARG00000021335 (1)
  • Ensembl(GRCz11):ENSDARG00000039966 (1)
  • ORTHOLOGY for prom1a (Chr: 14)
    CITATIONS (32)