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ZIRC
ZFIN ID: ZDB-GENE-030131-1558
Gene Name: CCR4-NOT transcription complex subunit 9
Gene Symbol: cnot9
Sequence Ontology ID : SO:0000704

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Previous Names: rqcd1 (1), wu:fb52b11, wu:fb74e08, zgc:85618

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in negative regulation of intracellular estrogen receptor signaling pathway, negative regulation of translation, and positive regulation of nuclear receptor transcription  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6907391]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37457 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43792 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cnot9 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cnot9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of intracellular estrogen receptor signaling pathway (more)
    Cellular Component CCR4-NOT complex (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007216 (1)
  • InterPro:IPR011989 (1)
  • InterPro:IPR016024 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cnot9-201 (1) 1420
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cnot9 No data available
    MARKER RELATIONSHIPS
    cnot9Contained in: [BAC] DKEYP-84A8 (1)
    cnot9Encodes: [EST] fb52b11, fb74e08, IMAGE:6907391 (1) (order this)
    [cDNA] MGC:85618 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_214760 (1) 2017bp
    Genomic GenBank:BX548072 (1) 188936bp
    Select Tool
    Polypeptide UniProtKB:Q6NWL4 (1) 298aa
    Sequence Clusters UniGene:75506 (1)
    Sequence Information (all 16)
    ORTHOLOGY for cnot9 (Chr: 22)
    CITATIONS (23)