ZFIN ID: ZDB-GENE-030131-1558
Gene Name: CCR4-NOT transcription complex subunit 9
Gene Symbol: cnot9    Nomenclature History

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Previous Names: rqcd1 (1), wu:fb52b11, wu:fb74e08, zgc:85618

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to be involved in negative regulation of intracellular estrogen receptor signaling pathway; negative regulation of translation; and positive regulation of nuclear receptor transcription coactivator activity. Predicted to localize to CCR4-NOT core complex and P-body. Orthologous to human CNOT9 (CCR4-NOT transcription complex subunit 9).
Genome Resources: Alliance (1),  Gene:406632 (1),  Ensembl(GRCz11):ENSDARG00000033855 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6907391]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37457 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43792 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cnot9 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cnot9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of intracellular estrogen receptor signaling pathway (more)
    Cellular Component CCR4-NOT complex (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cnot9-201 (1)    Ensembl 1420
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cnot9 No data available
    MARKER RELATIONSHIPS
    cnot9 Contained in: [BAC] DKEYP-84A8 (1)
    cnot9 Encodes: [EST] fb52b11, fb74e08, IMAGE:6907391 (1)
    [cDNA] MGC:85618 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_214760 (1) 2017 nt
    Genomic GenBank:BX548072 (1) 188936 nt
    Select Tool
    Polypeptide UniProtKB:Q6NWL4 (1) 298 aa
    Sequence Information (all 15)
    ORTHOLOGY for cnot9 ( Chr: 22 )
    CITATIONS (26)