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ZIRC
ZFIN ID: ZDB-GENE-021204-1
Gene Name: branched chain ketoacid dehydrogenase kinase
Gene Symbol: bckdk    Nomenclature History

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Previous Names: cb233 (1), wu:fa04g07, wu:fb80b08, zgc:55984

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have protein kinase activity. Predicted to be involved in phosphorylation. Human ortholog(s) of this gene implicated in branched-chain keto acid dehydrogenase kinase deficiency. Is expressed in several structures, including midbrain neural keel; midbrain neural rod; neural plate; pancreatic system; and primary neurons. Orthologous to human BCKDK (branched chain keto acid dehydrogenase kinase).
Genome Resources: Alliance (1),  Gene:282677 (1),  Ensembl(GRCz11):ENSDARG00000016904 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa38517 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH bckdk HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    branched-chain keto acid dehydrogenase kinase deficiency Alliance Branched-chain ketoacid dehydrogenase kinase deficiency 614923
    DISEASE ASSOCIATED WITH bckdk VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process phosphorylation (more)
    Cellular Component mitochondrial matrix (more)
    Molecular Function ATP binding (more)
    GO Terms (all 12)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA bckdk-201 (1)    Ensembl 2831
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM bckdk No data available
    MARKER RELATIONSHIPS
    bckdk Contained in: [BAC] DKEY-261J4 (1) (order this)
    bckdk Encodes: [EST] cb233 (1) (order this), fa04g07, fb80b08 (order this), IMAGE:7148750 (1) (order this)
    [cDNA] MGC:55984 (1) (order this), MGC:192782 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213060 (1) 2859 bp
    Genomic GenBank:AL935280 (1) 221563 bp Blast at MegaBLAST
    Polypeptide UniProtKB:B0R159 (1) 428 aa
    Sequence Clusters UniGene:75460 (1)
    Sequence Information (all 23)
    ORTHOLOGY for bckdk ( Chr: 5 )
    CITATIONS (26)