ZFIN ID: ZDB-GENE-021031-2
Gene Name: archain 1a
Gene Symbol: arcn1a    Nomenclature History

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Previous Names: arcn1, cb334 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to be involved in Golgi localization; endoplasmic reticulum to Golgi vesicle-mediated transport; and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to localize to COPI vesicle coat and cytosol. Orthologous to human ARCN1 (archain 1).
Genome Resources: Alliance (1),  Gene:266982 (1),  Ensembl(GRCz11):ENSDARG00000002792 (2)
GENE EXPRESSION
All Expression Data: Fig. 9 from Chen et al., 2017
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arcn1a HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay 617164
DISEASE ASSOCIATED WITH arcn1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein transport (more)
Cellular Component COPI vesicle coat (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA arcn1a-201 (1)    Ensembl 3038
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM arcn1a No data available
MARKER RELATIONSHIPS
arcn1a Contained in: [BAC] DKEY-151N15 (1) (order this)
arcn1a Encodes: [EST] fb76d02, fc52b08
[cDNA] MGC:55356 (1), MGC:192716 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_201459 (1) 3051 nt
Genomic GenBank:BX294169 (1) 73230 nt
Select Tool
Polypeptide UniProtKB:Q7ZW27 (1) 509 aa
Sequence Information (all 16)
ORTHOLOGY for arcn1a ( Chr: 5 )
CITATIONS (24)