ZFIN ID: ZDB-GENE-021031-1
Gene Name: neogenin 1a
Gene Symbol: neo1a
Sequence Ontology ID : SO:0000704

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Previous Names: neo1, zneo1 (1), cb333 (1), zgc:109795

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 20 figures from 9 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2001 [cb333]
  1 figure (1 image) from Thisse et al., 2004 [MGC:109795]
  4 figures (13 images) from Rauch et al., 2003 [fq38a06]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Adult (90d-730d, breeding adult)
  anterior neural keel, brain, central nervous system, cerebellum (all 40) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011151Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la016169Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la016170Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la026154Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • mn0231Gt Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6086 Point Mutation Unknown Splice Site ENU
    sa11491 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17579 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa21085 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa34192 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34193 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41029 Point Mutation Unknown Premature Stop ENU
    Targeting reagents: MO1-neo1a (1), MO2-neo1a (1)
    PHENOTYPE
    Data: 8 figures from 2 publications
    Observed in: brain anterior-posterior axis, brain, brainstem and spinal white matter axon, CaP motoneuron axon (all 29) expand
    DISEASE ASSOCIATED WITH neo1a HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process nervous system development (more)
    Cellular Component integral component of membrane (more)
    Molecular Function receptor activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003598 (1)
  • InterPro:IPR003599 (1)
  • InterPro:IPR003961 (1)
  • InterPro:IPR007110 (1)
  • InterPro:IPR010560 (1)
  • InterPro:IPR013098 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR033024 (1)
  • InterPro:IPR036116 (1)
  • InterPro:IPR036179 (1)
  • PROSITE:PS50835 (1)
  • PROSITE:PS50853 (1)
  • Pfam:PF00041 (1)
  • Pfam:PF06583 (1)
  • Pfam:PF07679 (1)
  • Pfam:PF13895 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA neo1a-001 (1) 882
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM neo1a No data available
    MARKER RELATIONSHIPS
    neo1aContained in: [BAC] DKEY-126F20 (1) (order this), DKEYP-47G1 (1)
    neo1aEncodes: [EST] cb333 (1) (order this), fq38a06 (1) (order this)
    [cDNA] cssl:d230 (1), MGC:109795 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173218 (1) 6300bp
    Genomic GenBank:BX927325 (1) 208845bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IIB3 (1) 1432aa
    Sequence Clusters UniGene:18117 (1)
    Sequence Information (all 52)
    OTHER neo1a GENE PAGES
  • Alliance (1)
  • Gene:266983 (1)
  • VEGA:OTTDARG00000020304 (1)
  • Ensembl(GRCz10):ENSDARG00000102855 (1)
  • ORTHOLOGY for neo1a (Chr: 7)
    CITATIONS (40)