Gene

btaf1

ID

ZDB-GENE-021025-1

Name

BTAF1 RNA polymerase II, B-TFIID transcription factor-associated

Symbol

btaf1 Nomenclature History

Previous Names

TAFII (1)
wu:fd60h10
wu:fe26c12

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Predicted to have ATP binding activity. Orthologous to human BTAF1 (B-TFIID TATA-box binding protein associated factor 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With btaf1 Human Ortholog

No data available

Associated With btaf1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000330	SNF2, N-terminal
Domain	IPR001650	Helicase, C-terminal domain-like
Domain	IPR014001	Helicase superfamily 1/2, ATP-binding domain
Domain	IPR022707	Mot1, central domain
Domain	IPR044078	Mot1, ATP-binding domain
Family	IPR044972	TATA-binding protein-associated factor Mot1
Homologous_superfamily	IPR011989	Armadillo-like helical
Homologous_superfamily	IPR016024	Armadillo-type fold
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily	IPR038718	SNF2-like, N-terminal domain superfamily
Repeat	IPR000357	HEAT repeat

Domain Details Per Protein

Protein	Length	Armadillo-like helical	Armadillo-type fold	HEAT repeat	Helicase, C-terminal domain-like	Helicase superfamily 1/2, ATP-binding domain	Mot1, ATP-binding domain	Mot1, central domain	P-loop containing nucleoside triphosphate hydrolase	SNF2-like, N-terminal domain superfamily	SNF2, N-terminal	TATA-binding protein-associated factor Mot1
UniProtKB:A0A8M2BGW0 InterPro	1861

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	btaf1-202 (1) Ensembl	Havana	6655 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	btaf1-002 (1) Ensembl	Havana	389 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	btaf1-003 (1) Ensembl	Havana	543 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	btaf1-004 (1) Ensembl	Havana	499 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations