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ZIRC
ZFIN ID: ZDB-GENE-020905-5
Gene Name: paired related homeobox 1a
Gene Symbol: prrx1a
Sequence Ontology ID : SO:0000704

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Previous Names: pmx1, prrx1, prx1 (1), cb329 (1), wu:fa09h05, wu:fb52c01, zgc:64055

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have sequence-specific DNA binding activity; involved in cranial skeletal system development, epithelial to mesenchymal transition, and heart looping; predicted to localize to the  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b1246 Small Deletion Unknown Frameshift, Premature Stop CRISPR
el558 Small Deletion Unknown Frameshift, Premature Stop TALEN
sa19740 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH prrx1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    agnathia-otocephaly complex Agnathia-otocephaly complex 202650
    DISEASE ASSOCIATED WITH prrx1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process atrial cardiac muscle cell action potential (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 9)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA prrx1a-201 (1) 1908
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM prrx1a
    MARKER RELATIONSHIPS
    prrx1aContained in: [BAC] DKEY-218H11 (1) (order this)
    prrx1aEncodes: [EST] cb329 (1) (order this), fa09h05 (1), fb52c01 (1)
    [cDNA] MGC:64055 (1) (order this), MGC:192275 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_214734 (1) 1617bp
    Genomic GenBank:BX548024 (1) 218565bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q7T373 (1) 245aa
    Sequence Clusters UniGene:32622 (1)
    Sequence Information (all 18)
    ORTHOLOGY for prrx1a (Chr: 2)
    CITATIONS (36)