Gene

copa

ID
ZDB-GENE-020905-2
Name
COPI coat complex subunit alpha
Symbol
copa Nomenclature History
Previous Names
  • cb281 (1)
  • fb13c12
  • sneezy
  • wu:fb13c12
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to have structural molecule activity. Involved in notochord development and somite development. Predicted to localize to COPI vesicle coat. Is expressed in several structures, including axis; hatching gland; mesoderm; notochord; and pectoral fin. Orthologous to human COPA (COPI coat complex subunit alpha).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
10 figures from 5 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
22 figures from 7 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With copa Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
{Autoimmune interstitial lung, joint, and kidney disease} 616414
Associated With copa Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019775 WD40 repeat, conserved site
Domain IPR006692 Coatomer, WD associated region
Domain IPR010714 Coatomer, alpha subunit, C-terminal
Domain IPR017986 WD40-repeat-containing domain
Family IPR016391 Coatomer alpha subunit
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
Repeat IPR001680 WD40 repeat
Repeat IPR020472 G-protein beta WD-40 repeat
Domain Details Per Protein
Protein Length Coatomer alpha subunit Coatomer, alpha subunit, C-terminal Coatomer, WD associated region G-protein beta WD-40 repeat WD40 repeat WD40 repeat, conserved site WD40-repeat-containing domain WD40-repeat-containing domain superfamily WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:B3DGP8 1224
UniProtKB:A7E2H7 538
UniProtKB:Q6JWU9 1226
UniProtKB:F1QDQ1 1224
UniProtKB:A0A286Y8Z3 538
UniProtKB:Q6DRK5 1224
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations