ZFIN ID: ZDB-GENE-020905-1
Gene Name: ATPase, Ca++ transporting, cardiac muscle, fast twitch 1
Gene Symbol: atp2a1
Previous Names: acc, accordion, cb279 (1), serca1 (1), serca (1), wu:cegs655, wu:fb17h11, wu:fb19b10, zgc:92110
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 39 figures from 11 publications
Directly Submitted Expression Data: 7 figures (15 images) from Rauch et al., 2003 [fb19b10]
  12 figures (21 images) from Rauch et al., 2003 [fb39d07]
  7 figures (22 images) from Rauch et al., 2003 [cegs655]
  4 figures (7 images) from Thisse et al., 2001 [cb279]
Wild-type Stages, Structures: Segmentation:10-13 somites (14.0h-16.0h) to Adult (90d-730d, breeding adult)
  adaxial cell, eye, gill, mesoderm (all 12) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
dta5 Point Mutation Unknown Unknown ENU
mi25i Point Mutation Unknown Missense ENU
mi289a Point Mutation Unknown Missense ENU
sa10632 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa16659 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa17743 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tc249a Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • ti284a Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tm286 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tn218b Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tp72x Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tq206 Point Mutation Unknown Missense ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • ty20 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-atp2a1 (1)
    PHENOTYPE
    Data: 16 figures from 5 publications
    Observed in: fast muscle cell skeletal muscle myofibril, locomotion, mechanosensory behavior, musculoskeletal movement (all 15) expand
    DISEASE ASSOCIATED WITH atp2a1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Brody myopathy Brody myopathy 601003
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular calcium ion homeostasis (more)
    Cellular Component H zone (more)
    Molecular Function ATP binding (more)
    GO Terms (all 27)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001757 (1)
  • InterPro:IPR004014 (1)
  • InterPro:IPR005782 (1)
  • InterPro:IPR006068 (1)
  • InterPro:IPR008250 (1)
  • InterPro:IPR018303 (1)
  • InterPro:IPR023214 (1)
  • InterPro:IPR023298 (1)
  • InterPro:IPR023299 (1)
  • PROSITE:PS00154 (1)
  • Pfam:PF00122 (1)
  • Pfam:PF00689 (1)
  • Pfam:PF00690 (1)
  • Pfam:PF08282 (1)
  • EC:3.6.3.8 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp2a1-001 (1) 3390
    atp2a1-002 (1) 3311
    ncRNA atp2a1-003 (1) 520
    atp2a1-004 (1) 348
    mRNA atp2a1-005 (1) 416
    atp2a1-006 (1) 1049
    atp2a1-007 (1) 502
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atp2a1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atp2a1Contained in: [BAC] CH73-46H18 (1) (order this), CH211-11K18 (1) (order this)
    atp2a1Contains: [SNP] rs3727695 (1), rs3727696 (1), rs3727697 (1), rs3727698 (1)
    atp2a1Encodes: [EST] cb279 (1) (order this), cegs655 (1) (order this), fb17h11 (1), fb19b10 (1) (order this), fb39d07 (1) (order this), IMAGE:6910802 (1) (order this), IMAGE:7142105 (1) (order this)
    [cDNA] MGC:92110 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007029 (1) 2985bp
    Genomic GenBank:BX511232 171843bp
    Select Tool
    Polypeptide UniProtKB:Q5U3A4 (1) 1005aa
    Sequence Clusters UniGene:29167 (1)
    Sequence Information (all 27)
    OTHER atp2a1 GENE PAGES
  • Gene:260440 (1)
  • VEGA:OTTDARG00000032779 (1)
  • Ensembl(GRCz10):ENSDARG00000020574 (1)
  • ORTHOLOGY for atp2a1 (Chr: 3)
    Species Symbol Chromosome Accession # Evidence
    Human ATP2A1 16
  • Gene:487
  • OMIM:108730
  • HGNC:811
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Mouse Atp2a1 7
  • MGI:105058
  • Gene:11937
  • Amino acid sequence comparison (1)
    Download Curated Orthology
    CITATIONS (44)