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ZIRC
ZFIN ID: ZDB-GENE-020905-1
Gene Name: ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1
Gene Symbol: atp2a1
Sequence Ontology ID : SO:0001217

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Previous Names: acc, accordion, cb279 (1), serca1 (1), serca (1), wu:cegs655, wu:fb17h11, wu:fb19b10, zgc:92110

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have several functions, including ATP binding activity; calcium ion binding activity; and ion transmembrane transporter activity, phosphorylative mechanism. Involved in several  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
dta5 Point Mutation Unknown Missense ENU
mi25i Point Mutation Unknown Missense ENU
mi289a Point Mutation Unknown Missense ENU
sa10632 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16659 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17743 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tc249a Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • ti284a Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tm286 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tn218b Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tp72x Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tq206 Point Mutation Unknown Missense ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • ty20 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH atp2a1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Brody myopathy Brody myopathy 601003
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular calcium ion homeostasis (more)
    Cellular Component endoplasmic reticulum-Golgi intermediate compartment (more)
    Molecular Function ATPase activity (more)
    GO Terms (all 27)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA atp2a1-003 (1) 520
    atp2a1-004 (1) 348
    mRNA atp2a1-201 (1) 3390
    atp2a1-202 (1) 3311
    atp2a1-203 (1) 1049
    atp2a1-205 (1) 416
    atp2a1-206 (1) 502
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atp2a1 No data available
    MARKER RELATIONSHIPS
    atp2a1 Contained in: [BAC] CH73-46H18 (1) (order this), CH211-11K18 (1) (order this)
    atp2a1 Contains: [SNP] rs3727695 (1), rs3727696 (1), rs3727697 (1), rs3727698 (1)
    atp2a1 Encodes: [EST] cb279 (1) (order this), cegs655 (1) (order this), fb17h11 (1), fb19b10 (1) (order this), fb39d07 (1) (order this), IMAGE:6910802 (1) (order this), IMAGE:7142105 (1) (order this)
    [cDNA] MGC:92110 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007029 (1) 2985 bp
    Genomic GenBank:BX511232 171843 bp
    Select Tool
    Polypeptide UniProtKB:Q5U3A4 (1) 1005 aa
    Sequence Clusters UniGene:29167 (1)
    Sequence Information (all 28)
    ORTHOLOGY for atp2a1 ( Chr: 3 )
    CITATIONS (53)