ZFIN ID: ZDB-GENE-020419-38
Gene Name: telomeric repeat binding factor a
Gene Symbol: terfa
Sequence Ontology ID : SO:0000704

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Previous Names: CHUNP6903, wu:fi15d05, wu:fi22b03 (1), zgc:111909, zgc:114011

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to telomerase activity; predicted to be involved in several processes, including protein localization to chromosome, telomeric region, regulation of nucleobase-containing  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:111909]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1182Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hi3678Tg Transgenic Insertion Exon 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa26372 Point Mutation Unknown Splice Site ENU
    Targeting reagents:
    PHENOTYPE
    Data: 9 figures from 4 publications
    Observed in:
    DISEASE ASSOCIATED WITH terfa HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH terfa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protection from non-homologous end joining at telomere (more)
    Cellular Component nuclear chromosome, telomeric region (more)
    Molecular Function DNA binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001005 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR013867 (1)
  • InterPro:IPR017357 (1)
  • InterPro:IPR017930 (1)
  • InterPro:IPR030657 (1)
  • InterPro:IPR036507 (1)
  • PROSITE:PS51294 (1)
  • Pfam:PF00249 (1)
  • Pfam:PF08558 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA terfa-002 (1) 584
    mRNA terfa-201 (1) 2041
    terfa-204 (1) 1130
    terfa-205 (1) 556
    terfa-206 (1) 931
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM terfa No data available
    MARKER RELATIONSHIPS
    terfaContained in: [Fosmid] ZFOS-1578F7 (1)
    terfaEncodes: [BAC END] zk3a14
    [EST] fi15d05 (1), fi22b03 (1)
    [cDNA] MGC:111909 (1) (order this), MGC:114011 (1), MGC:192548 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173243 (1) 2232bp
    Genomic GenBank:CU695140 (1) 34480bp
    Select Tool
    Polypeptide UniProtKB:Q4FZZ9 (1) 575aa
    Sequence Clusters UniGene:76815 (1)
    Sequence Information (all 40)
    OTHER terfa GENE PAGES
  • Alliance (1)
  • Gene:192316 (1)
  • VEGA:OTTDARG00000035891 (1)
  • Ensembl(GRCz11):ENSDARG00000039302 (2)
  • ORTHOLOGY for terfa (Chr: 4)
    CITATIONS (31)