ZFIN ID: ZDB-GENE-020419-32
Gene Name: histone deacetylase 1
Gene Symbol: hdac1
Sequence Ontology ID : SO:0000704

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Previous Names: hdac-1 (1), chunp6919, col, colgate, mp:zf637-2-001987, wu:fb19h11 (1), wu:fi06f03 (1), zgc:101582, zgc:65818 (1)

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 16 figures from 8 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6904025]
  7 figures (9 images) from Thisse et al., 2008 [MGC:101582]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b382 Point Mutation Unknown Unknown ENU
hi1618Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hi2628Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la013452Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • rw399 Point Mutation Unknown Unknown
    s436 Point Mutation Unknown Unknown
    sa3005 Point Mutation Unknown Premature Stop ENU
    t22925 Point Mutation Unknown Unknown
  • European Zebrafish Resource Center (EZRC) (order this)
  • t23715 Point Mutation Unknown Unknown
  • European Zebrafish Resource Center (EZRC) (order this)
  • t24411 Point Mutation Unknown Unknown
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 35 figures from 14 publications
    Observed in:
    DISEASE ASSOCIATED WITH hdac1 HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process Wnt signaling pathway (more)
    Cellular Component nucleus (more)
    Molecular Function NAD-dependent histone deacetylase activity (H3-K14 specific) (more)
    GO Terms (all 31)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000286 (1)
  • InterPro:IPR003084 (1)
  • InterPro:IPR023696 (1)
  • InterPro:IPR023801 (1)
  • InterPro:IPR037138 (1)
  • Pfam:PF00850 (1)
  • EC:3.5.1.98 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hdac1-001 (1) 2242
    ncRNA hdac1-002 (1) 2165
    hdac1-003 (1) 1972
    hdac1-004 (1) 1249
    hdac1-005 (1) 849
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hdac1 No data available
    MARKER RELATIONSHIPS
    hdac1Contained in: [BAC] CH73-130A3 (1) (order this)
    hdac1Encodes: [EST] fb19h11 (1), fi06f03 (1), IMAGE:6904025 (1) (order this), zf637-2-001987
    [STS] chunp6919
    [cDNA] MGC:65818 (order this), MGC:101582 (1) (order this), MGC:193070 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173236 (1) 2213bp
    Genomic GenBank:CU633192 (1) 93120bp
    Select Tool
    Polypeptide UniProtKB:F1R653 (1) 480aa
    Sequence Clusters UniGene:31752 (1)
    Sequence Information (all 31)
    OTHER hdac1 GENE PAGES
  • Alliance (1)
  • Gene:192302 (1)
  • VEGA:OTTDARG00000034709 (1)
  • Ensembl(GRCz10):ENSDARG00000015427 (1)
  • ORTHOLOGY for hdac1 (Chr: 19)
    CITATIONS (79)