Gene

hdac1

ID
ZDB-GENE-020419-32
Name
histone deacetylase 1
Symbol
hdac1 Nomenclature History
Previous Names
  • hdac-1 (1)
  • chunp6919
  • col
  • colgate
  • mp:zf637-2-001987
  • wu:fb19h11 (1)
  • wu:fi06f03 (1)
  • zgc:101582
  • zgc:65818 (1)
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to have histone deacetylase activity. Involved in several processes, including animal organ development; determination of dorsal identity; and nervous system development. Predicted to localize to Sin3-type complex. Is expressed in immature eye; nervous system; pectoral fin; and pharyngeal arch. Orthologous to human HDAC1 (histone deacetylase 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
27 figures from 15 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
69 figures from 24 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hdac1 Human Ortholog
No data available
Associated With hdac1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR023801 Histone deacetylase domain
Family IPR000286 Histone deacetylase family
Family IPR003084 Histone deacetylase
Family IPR050284 Histone deacetylase and polyamine deacetylase
Homologous_superfamily IPR023696 Ureohydrolase domain superfamily
Homologous_superfamily IPR037138 Histone deacetylase domain superfamily
Domain Details Per Protein
Protein Length Histone deacetylase Histone deacetylase and polyamine deacetylase Histone deacetylase domain Histone deacetylase domain superfamily Histone deacetylase family Ureohydrolase domain superfamily
UniProtKB:Q8JIY7 480
UniProtKB:A0A2R8QIW0 484
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA hdac1-201 (1) Ensembl 2,242 nt
mRNA hdac1-204 (1) Ensembl 1,439 nt
mRNA hdac1-205 (1) Ensembl 5,435 nt
ncRNA hdac1-004 (1) Ensembl 1,249 nt
ncRNA hdac1-005 (1) Ensembl 849 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations