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ZIRC
ZFIN ID: ZDB-GENE-020228-1
Gene Name: spinster homolog 1 (Drosophila)
Gene Symbol: spns1
Sequence Ontology ID : SO:0001217

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Previous Names: nrs (1), spinl, etID64740.3 (1), not really started, wu:fb95b12, wu:fi37e11 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in autophagosome maturation and cellular senescence. Predicted to localize to the integral component of membrane and mitochondrial inner membrane. Is expressed in yolk syncytial layer.  ...
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (5 images) from Thisse et al., 2004 [MGC:55239]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi891Tg Transgenic Insertion 5' UTR Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40019 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH spns1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH spns1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process autophagy (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 10)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA spns1-201 (1) 2593
    spns1-202 (1) 760
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM spns1 No data available
    MARKER RELATIONSHIPS
    spns1 Contained in: [BAC] CH211-66P13 (1) (order this)
    spns1 Contains: [SNP] rs3727685 (1), rs3727686 (1), rs3727687 (1), rs3727688 (1), rs3727689 (1)
    spns1 Encodes: [EST] fb95b12 (1), fi37e11 (1)
    [cDNA] MGC:55239 (1) (order this), MGC:192713 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_153663 (1) 2643 bp
    Genomic GenBank:BX784026 (1) 162371 bp
    Select Tool
    Polypeptide UniProtKB:B2GSS2 (1) 506 aa
    Sequence Clusters UniGene:76573 (1)
    Sequence Information (all 31)
    ORTHOLOGY for spns1 ( Chr: 3 )
    CITATIONS (34)