ZFIN ID: ZDB-GENE-011128-11
Gene Name: guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
Gene Symbol: gnat1
Sequence Ontology ID : SO:0000704

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Previous Names: fk56e06, Galpha t1 (1), transducin alpha (rod) (1), wu:fk56e06 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have G protein-coupled receptor binding activity, G-protein beta/gamma-subunit complex binding activity, and GTPase activity; predicted to be involved in adenylate cyclase-modulating G  ...
GENE EXPRESSION
All Expression Data: 28 figures from 16 publications
Directly Submitted Expression Data: 5 figures (4 images) from Thisse et al., 2004 [MGC:73094]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la025584Tg Transgenic Insertion Unknown Unknown DNA
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH gnat1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
congenital stationary night blindness 1G Night blindness, congenital stationary, type 1G 616389
congenital stationary night blindness autosomal dominant 3 Night blindness, congenital stationary, autosomal dominant 3 610444
DISEASE ASSOCIATED WITH gnat1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process response to light stimulus (more)
Cellular Component membrane (more)
Molecular Function G-protein beta/gamma-subunit complex binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001019 (1)
  • InterPro:IPR001408 (1)
  • InterPro:IPR011025 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF00503 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gnat1-201 (1) 1967
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gnat1 No data available
    MARKER RELATIONSHIPS
    gnat1Contained in: [BAC] DKEY-20F24 (1) (order this)
    gnat1Encodes: [EST] fk56e06
    [cDNA] MGC:73094 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131868 (1) 1900bp
    Genomic GenBank:BX950172 (1) 231139bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q90WX6 (1) 350aa
    Sequence Clusters UniGene:32527 (1)
    Sequence Information (all 11)
    OTHER gnat1 GENE PAGES
  • Alliance (1)
  • Gene:140428 (1)
  • VEGA:OTTDARG00000019911 (1)
  • Ensembl(GRCz11):ENSDARG00000044199 (2)
  • ORTHOLOGY for gnat1 (Chr: 6)
    CITATIONS (57)