ZFIN ID: ZDB-GENE-011108-2
Gene Name: secreted frizzled-related protein 5
Gene Symbol: sfrp5
Sequence Ontology ID : SO:0000704

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Previous Names: sfrp1 (1), zgc:101849

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 15 figures from 8 publications
Directly Submitted Expression Data: 6 figures (29 images) from Thisse et al., 2004 [MGC:101849]
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Larval:Day 6 (144.0h-168.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15896 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22366 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • wz08 Small Deletion Exon 1 Unknown CRISPR
    Targeting reagents:
    PHENOTYPE
    Data: 3 figures from Stuckenholz et al., 2013
    Observed in:
    DISEASE ASSOCIATED WITH sfrp5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sfrp5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process forebrain development (more)
    Cellular Component extracellular region (more)
    Molecular Function G protein-coupled receptor activity (more)
    GO Terms (all 21)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001134 (1)
  • InterPro:IPR008993 (1)
  • InterPro:IPR015526 (1)
  • InterPro:IPR018933 (1)
  • InterPro:IPR020067 (1)
  • InterPro:IPR034860 (1)
  • InterPro:IPR036790 (1)
  • PROSITE:PS50038 (1)
  • PROSITE:PS50189 (1)
  • Pfam:PF01392 (1)
  • Pfam:PF01759 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sfrp5-001 (1) 1976
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sfrp5 No data available
    MARKER RELATIONSHIPS
    sfrp5Contained in: [BAC] DKEY-285M9 (1) (order this)
    sfrp5Encodes: [cDNA] MGC:101849 (1) (order this), MGC:191440 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131858 (1) 2006bp
    Genomic GenBank:CU695206 (1) 75368bp
    Select Tool
    Polypeptide UniProtKB:F1QJG6 (1) 310aa
    Sequence Clusters UniGene:151871 (1)
    Sequence Information (all 22)
    OTHER sfrp5 GENE PAGES
  • Alliance (1)
  • Gene:117510 (1)
  • VEGA:OTTDARG00000035464 (1)
  • Ensembl(GRCz11):ENSDARG00000039041 (1)
  • ORTHOLOGY for sfrp5 (Chr: 13)
    CITATIONS (33)