ZFIN Gene: etv6

ZFIN ID: ZDB-GENE-010727-1

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Gene Name:	ets variant 6
Gene Symbol:	etv6
Previous Names:	id:ibd2308, ztel (1)
Location:	Chr: 4 Details
Nomenclature History

Gene Name:

ets variant 6

Gene Symbol:

etv6

Previous Names:

id:ibd2308, ztel (1)

Location:

Chr: 4 Details

Nomenclature History

GENE EXPRESSION
All Expression Data:	6 figures from 3 publications
Directly Submitted Expression Data:	1 figure (1 image) from Thisse et al., 2004 [MGC:55785]
	4 figures (6 images) from Kudoh et al., 2001 [ibd2308]
Wild-type Stages, Structures:	Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
	blood island , brain , epiblast , hypoblast (all 7)
Curated Microarray Expression:	GEO (1)

GENE EXPRESSION

All Expression Data:

6 figures from 3 publications

Directly Submitted Expression Data:

1 figure (1 image) from Thisse et al., 2004 [MGC:55785]

4 figures (6 images) from Kudoh et al., 2001 [ibd2308]

Wild-type Stages, Structures:

Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)

blood island, brain, epiblast, hypoblast (all 7) expand

Curated Microarray Expression:

GEO (1)

PHENOTYPE

Phenotype of Human Orthologue	OMIM Phenotype ID
Leukemia, acute myeloid, somatic	601626
Thrombocytopenia 5	616216

GENE ONTOLOGY

Ontology	GO Term
Biological Process	regulation of transcription, DNA-templated (more)
Cellular Component	nucleus (more)
Molecular Function	DNA binding (more)

GO Terms (all 5)

PROTEIN FAMILIES, DOMAINS AND SITES
InterPro:IPR000418 (1) InterPro:IPR003118 (1) InterPro:IPR011991 (1) InterPro:IPR013761 (1)	PROSITE:PS00346 (1) PROSITE:PS50061 (1) PROSITE:PS51433 (1)	Pfam:PF00178 (1) Pfam:PF02198 (1)

SEGMENT (CLONE AND PROBE) RELATIONSHIPS

etv6 Encodes:

[EST] ibd2308 (order this)
[cDNA] MGC:55785 (1) (order this), MGC:77384 (1) (order this), MGC:192902 (1) (order this)

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_131832 (1)	1945 bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega
Genomic	RefSeq:NW_003337254 (1)	10603 bp	Blast at Vega
Polypeptide	UniProtKB:B2GTA2 (1)	444 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast Vega Protein Blast
Sequence Clusters	UniGene:10306 (1)

Type

Accession #

Length (bp/aa)

Analysis

RNA

RefSeq:NM_131832 (1)

1945 bp

Select Tool

ZFIN BLAST

NCBI BLAST

Ensembl

UCSC BLAT

Vega

Genomic

RefSeq:NW_003337254 (1)

10603 bp

Blast at Vega

Polypeptide

UniProtKB:B2GTA2 (1)

444 aa

Select Tool

ZFIN BLAST

SIB BLAST

Ensembl Protein Blast

Vega Protein Blast

Sequence Clusters

UniGene:10306 (1)

ORTHOLOGY

				Evidence
Species	Symbol	Chr (Position)	Accession #	AA
Zebrafish	etv6	4
Human	ETV6	12 (12p13)	OMIM:600618 Gene:2120
Mouse	Etv6	6 ( 64.58 cM)	MGI:109336 Gene:14011
Orthology Details