ZFIN Gene: etv6

ZFIN ID: ZDB-GENE-010727-1

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Gene Name:	ets variant 6
Gene Symbol:	etv6
Previous Names:	ztel (1), id:ibd2308
Location:	Chr: 4 Details
Nomenclature History

Gene Name:

ets variant 6

Gene Symbol:

etv6

Previous Names:

ztel (1), id:ibd2308

Location:

Chr: 4 Details

Nomenclature History

GENE EXPRESSION
All Expression Data:	6 figures from 3 publications
Directly Submitted Expression Data:	1 figure (1 image) from Thisse et al., 2004 [MGC:55785]
	4 figures (6 images) from Kudoh et al., 2001 [ibd2308]
Wild-type Stages, Structures:	Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
	blood island , brain , epiblast , hypoblast (all 7)
Curated Microarray Expression:	GEO (1)

GENE EXPRESSION

All Expression Data:

6 figures from 3 publications

Directly Submitted Expression Data:

1 figure (1 image) from Thisse et al., 2004 [MGC:55785]

4 figures (6 images) from Kudoh et al., 2001 [ibd2308]

Wild-type Stages, Structures:

Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)

blood island, brain, epiblast, hypoblast (all 7) expand

Curated Microarray Expression:

GEO (1)

Phenotype of Human Orthologue	OMIM Phenotype ID
Leukemia, acute myeloid, somatic	601626

Phenotype of Human Orthologue

OMIM Phenotype ID

Leukemia, acute myeloid, somatic

601626

GENE ONTOLOGY

Ontology	GO Term
Biological Process	regulation of transcription, DNA-templated (more)
Cellular Component	nucleus (more)
Molecular Function	DNA binding (more)

GO Terms (all 5)

PROTEIN FAMILIES, DOMAINS AND SITES
InterPro:IPR000418 (1) InterPro:IPR003118 (1) InterPro:IPR011991 (1) InterPro:IPR013761 (1)	PROSITE:PS00346 (1) PROSITE:PS50061 (1) PROSITE:PS51433 (1)	Pfam:PF00178 (1) Pfam:PF02198 (1)

SEGMENT (CLONE AND PROBE) RELATIONSHIPS

etv6 Encodes:

[EST] ibd2308 (order this)
[cDNA] MGC:55785 (1) (order this), MGC:77384 (1) (order this), MGC:192902 (1) (order this)

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_131832 (1)	1945 bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega
Genomic	RefSeq:NW_003337254 (1)	10603 bp	Blast at Vega
Polypeptide	UniProtKB:B2GTA2 (1)	444 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast Vega Protein Blast
Sequence Clusters	UniGene:10306 (1)

Type

Accession #

Length (bp/aa)

Analysis

RNA

RefSeq:NM_131832 (1)

1945 bp

Select Tool

ZFIN BLAST

NCBI BLAST

Ensembl

UCSC BLAT

Vega

Genomic

RefSeq:NW_003337254 (1)

10603 bp

Blast at Vega

Polypeptide

UniProtKB:B2GTA2 (1)

444 aa

Select Tool

ZFIN BLAST

SIB BLAST

Ensembl Protein Blast

Vega Protein Blast

Sequence Clusters

UniGene:10306 (1)

ORTHOLOGY

				Evidence
Species	Symbol	Chr (Position)	Accession #	AA
Zebrafish	etv6	4
Human	ETV6	12 (12p13)	OMIM:600618 Gene:2120
Mouse	Etv6	6 ( 64.58 cM)	MGI:109336 Gene:14011
Orthology Details