ZFIN ID: ZDB-GENE-010618-3
Gene Name: ephrin-B3b
Gene Symbol: efnb3b    Nomenclature History

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Previous Names: efnb3, id:ibd5049 (1), zgc:111938

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have ephrin receptor binding activity. Involved in rhombomere boundary formation. Predicted to localize to glutamatergic synapse and integral component of presynaptic membrane. Is expressed in several structures, including axis; central nervous system; forebrain neural keel; immature eye; and sensory system. Orthologous to human EFNB3 (ephrin B3).
Genome Resources: Alliance (1),  Gene:114378 (1),  Ensembl(GRCz11):ENSDARG00000042277 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la025870Tg Transgenic Insertion Unknown Unknown DNA
sa40869 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-efnb3b N/A 1
    MO2-efnb3b N/A 2
    MO3-efnb3b N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH efnb3b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH efnb3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process rhombomere boundary formation (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ephrin receptor binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA efnb3b-201 (1)    Ensembl 2016
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM efnb3b No data available
    MARKER RELATIONSHIPS
    efnb3b Contained in: [BAC] DKEY-111F13 (1) (order this)
    efnb3b Encodes: [EST] eu323 (1), ibd5049 (1)
    [cDNA] MGC:111938 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_131806 (1) 996 nt
    Genomic GenBank:BX004772 (1) 210545 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q502Q3 (1) 342 aa
    Sequence Information (all 22)
    ORTHOLOGY for efnb3b ( Chr: 7 )
    CITATIONS (49)