ZFIN ID: ZDB-GENE-010328-6
Gene Name: claudin f
Gene Symbol: cldnf    Nomenclature History

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Previous Names: sr:nyz177 (1), wu:fb13d10 (1), zgc:109866

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to have structural molecule activity. Predicted to be involved in bicellular tight junction assembly and cell adhesion. Predicted to localize to bicellular tight junction and plasma membrane. Is expressed in several structures, including EVL; digestive system; ectoderm; hatching gland; and ovary. Human ortholog(s) of this gene implicated in ovarian cancer and pancreatic cancer. Orthologous to human CLDN4 (claudin 4).
Genome Resources: Alliance (1),  Gene:81585 (1),  Ensembl(GRCz11):ENSDARG00000043133 (2)
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 6 figures (15 images) from Thisse et al., 2004 [MGC:109866]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH cldnf HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH cldnf VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process bicellular tight junction assembly (more)
Cellular Component bicellular tight junction (more)
Molecular Function structural molecule activity (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA cldnf-201 (1)    Ensembl 1854
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM cldnf No data available
MARKER RELATIONSHIPS
cldnf Contained in: [BAC] CH211-235M3 (1)
cldnf Encodes: [EST] fb13d10 (1), nyz177 (1)
[cDNA] MGC:109866 (1), MGC:191504 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_131766 (1) 1859 nt
Genomic GenBank:CR382327 (1) 151282 nt
Select Tool
Polypeptide UniProtKB:Q568U4 (1) 237 aa
Sequence Information (all 18)
ORTHOLOGY for cldnf ( Chr: 15 )
CITATIONS (28)