ZFIN ID: ZDB-GENE-010302-2
Gene Name: forkhead box C1b
Gene Symbol: foxc1b
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: id:ibd5079 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 16 figures from 8 publications
Directly Submitted Expression Data: 4 figures (9 images) from Kudoh et al., 2001 [ibd5079]
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
el620 Small Deletion Unknown Unknown CRISPR
Targeting reagents:
PHENOTYPE
Data: Fig. 4 from De Val et al., 2008
Observed in:
DISEASE ASSOCIATED WITH foxc1b HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Axenfeld-Rieger syndrome type 3 Axenfeld-Rieger syndrome, type 3 602482
iridogoniodysgenesis syndrome Anterior segment dysgenesis 3, multiple subtypes 601631
DISEASE ASSOCIATED WITH foxc1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process blood vessel development (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 14)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001766 (1)
  • InterPro:IPR018122 (1)
  • InterPro:IPR030456 (1)
  • InterPro:IPR036388 (1)
  • InterPro:IPR036390 (1)
  • PROSITE:PS00657 (1)
  • PROSITE:PS00658 (1)
  • PROSITE:PS50039 (1)
  • Pfam:PF00250 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA foxc1b-001 (1) 1955
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM foxc1b
    MARKER RELATIONSHIPS
    foxc1bContained in: [BAC] DKEY-100F21 (1) (order this)
    foxc1bEncodes: [EST] ibd5079 (1) (order this)
    [cDNA] MGC:56256 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131729 (1) 1967bp
    Genomic GenBank:BX510653 (1) 90530bp
    Select Tool
    Polypeptide UniProtKB:Q9DE24 (1) 433aa
    Sequence Clusters UniGene:83301 (1)
    Sequence Information (all 14)
    OTHER foxc1b GENE PAGES
  • Alliance (1)
  • Gene:79375 (1)
  • VEGA:OTTDARG00000016918 (1)
  • Ensembl(GRCz11):ENSDARG00000055398 (2)
  • ORTHOLOGY for foxc1b (Chr: 20)
    CITATIONS (50)