ZFIN ID: ZDB-GENE-010201-1
Gene Name: SIX homeobox 4b
Gene Symbol: six4b
Sequence Ontology ID : SO:0000704

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Previous Names: six4.1, six8, etID17314.20 (1), wu:fj32d01 (1)

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: 19 figures from 13 publications
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH six4b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH six4b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription, DNA-templated (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR031701 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • Pfam:PF16878 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA six4b-001 (1) 2406
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM six4b
    MARKER RELATIONSHIPS
    six4bContained in: [BAC] DKEY-225H23 (1) (order this)
    six4bEncodes: [EST] fj32d01 (1)
    [cDNA] MGC:76807 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131717 (1) 2436bp
    Genomic GenBank:BX649231 (1) 153569bp
    Select Tool
    Polypeptide UniProtKB:Q5TYZ4 (1) 615aa
    Sequence Clusters UniGene:80781 (1)
    Sequence Information (all 20)
    OTHER six4b GENE PAGES
  • Alliance (1)
  • Gene:65232 (1)
  • VEGA:OTTDARG00000004931 (1)
  • Ensembl(GRCz11):ENSDARG00000031983 (2)
  • ORTHOLOGY for six4b (Chr: 20)
    CITATIONS (46)