ZFIN ID: ZDB-GENE-001212-2
Gene Name: ATPase, Na+/K+ transporting, alpha 1a polypeptide, tandem duplicate 2
Gene Symbol: atp1a1a.2
Previous Names: atp[a]1A2b (1), cb703 (1), zgc:110523
Location: Chr: 1   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 22 figures from 8 publications
Directly Submitted Expression Data: 6 figures (17 images) from Thisse et al., 2001 [cb703]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Adult (90d-730d, breeding adult)
  ball integument, epidermis, extension integument, gill (all 18) expand
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa19399
Knockdown reagents: MO1-atp1a1a.2 (1), MO2-atp1a1a.2 (1)
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process semicircular canal morphogenesis (more)
Cellular Component integral component of membrane (more)
Molecular Function ATP binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001757 (1)
  • InterPro:IPR004014 (1)
  • InterPro:IPR005775 (1)
  • InterPro:IPR006068 (1)
  • InterPro:IPR008250 (1)
  • InterPro:IPR018303 (1)
  • InterPro:IPR023214 (1)
  • InterPro:IPR023298 (1)
  • InterPro:IPR023299 (1)
  • PROSITE:PS00154 (1)
  • Pfam:PF00122 (1)
  • Pfam:PF00689 (1)
  • Pfam:PF00690 (1)
  • Pfam:PF00702 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp1a1a.2-001 (1) 3232
    ncRNA atp1a1a.2-002 (1) 479
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atp1a1a.2
    Tg(atp1a1a.2:RFP)
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atp1a1a.2 Contained in: [BAC] DKEY-208K14 (1)
    atp1a1a.2 Encodes: [EST] cb703 (2) (order this)
    [cDNA] MGC:110523 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131687 (1) 3235 bp
    Genomic GenBank:CU185242 (1) 180192 bp
    Select Tool
    Polypeptide UniProtKB:B8JKS9 (1) 1023 aa
    Sequence Clusters UniGene:79219 (1)
    Sequence Information (all 18)
    OTHER atp1a1a.2 GENE PAGES
  • Gene:64613 (1)
  • VEGA:OTTDARG00000029781 (1)
  • Ensembl(Zv9):ENSDARG00000007739 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish atp1a1a.2 1  
    Human ATP1A1 1 (1p21)
  • OMIM:182310
  • Gene:476
  • Mouse Atp1a1 3 ( 44.30 cM)
  • MGI:88105
  • Gene:11928
  • Orthology Details
    CITATIONS (23)