ZFIN ID: ZDB-GENE-001207-3
Gene Name: aryl-hydrocarbon receptor nuclear translocator 2
Gene Symbol: arnt2
Sequence Ontology ID : SO:0000704

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Previous Names: arnt2X (1), zfARNT2 (1), chunp6921, unm t30256, unm_t30256, zfARNT2a (1), zfARNT2b (1), zfARNT2c (1)

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: 8 figures from 5 publications
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1715Tg Transgenic Insertion Unknown Unknown DNA
hi2639cTg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la025771Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • m1055 Point Mutation Unknown Premature Stop ENU
    sa11162 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15572 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20863 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20864 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20865 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 21 figures from 11 publications
    Observed in:
    DISEASE ASSOCIATED WITH arnt2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Webb-Dattani syndrome 615926
    DISEASE ASSOCIATED WITH arnt2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to hypoxia (more)
    Cellular Component nucleus (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 20)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000014 (1)
  • InterPro:IPR001067 (1)
  • InterPro:IPR001610 (1)
  • InterPro:IPR011598 (1)
  • InterPro:IPR013655 (1)
  • InterPro:IPR013767 (1)
  • InterPro:IPR035965 (1)
  • InterPro:IPR036638 (1)
  • PROSITE:PS50112 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • Pfam:PF00989 (1)
  • Pfam:PF08447 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arnt2-001 (1) 6666
    ncRNA arnt2-003 (1) 542
    mRNA arnt2-004 (1) 2296
    ncRNA arnt2-005 (1) 2080
    ottdart00000036705 (1) 1618
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arnt2 No data available
    MARKER RELATIONSHIPS
    arnt2Contained in: [BAC] CH73-268O14 (1) (order this), DKEY-204O5 (1) (order this)
    arnt2Encodes: [STS] chunp6921
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131674 (1) 2294bp
    Genomic GenBank:BX936312 (1) 158510bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4ILG9 (1) 737aa
    Sequence Clusters UniGene:81424 (1)
    Sequence Information (all 35)
    OTHER arnt2 GENE PAGES
  • Alliance (1)
  • Gene:64277 (1)
  • VEGA:OTTDARG00000027333 (1)
  • Ensembl(GRCz11):ENSDARG00000103697 (1)
  • ORTHOLOGY for arnt2 (Chr: 7)
    CITATIONS (74)