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General Information
ZIRC
ZFIN ID: ZDB-GENE-001030-4
Gene Name: paired box 2b
Gene Symbol: pax2b
Sequence Ontology ID : SO:0001217

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Previous Names: pax2.2, Pax2.2

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity. Involved in peripheral nervous system development. Predicted to localize to the nucleus. Human ortholog(s) of this gene implicated in focal segmental  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10953 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pax2b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    focal segmental glomerulosclerosis 7 Glomerulosclerosis, focal segmental, 7 616002
    renal coloboma syndrome Papillorenal syndrome 120330
    DISEASE ASSOCIATED WITH pax2b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process peripheral nervous system development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pax2b-202 (1) 1467
    pax2b-203 (1) 735
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pax2b No data available
    MARKER RELATIONSHIPS
    pax2b Contained in: [Fosmid] CH1073-86F9 (1) (order this), ZFOS-1346H10 (1)
    pax2b Encodes: [cDNA] MGC:193755 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131640 (1) 2652 bp
    Genomic GenBank:CU565473 (1) 43485 bp
    Select Tool
    Polypeptide UniProtKB:F1R139 (1) 386 aa
    Sequence Clusters UniGene:81269 (1)
    Sequence Information (all 19)
    ORTHOLOGY for pax2b ( Chr: 12 )
    CITATIONS (47)