ZFIN ID: ZDB-GENE-000926-1
Gene Name: atonal bHLH transcription factor 7
Gene Symbol: atoh7
Sequence Ontology ID : SO:0000704

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Previous Names: ath5 (1), lak, lakritz, Zath5 (1)

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity and protein dimerization activity; involved in several processes, including cell fate commitment, pigmentation, and positive regulation of neurogenesis;  ...
GENE EXPRESSION
All Expression Data: 71 figures from 52 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Day 4 (96.0h-120.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16352 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35489 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • th241 Point Mutation Unknown Missense ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 14 figures from 13 publications
    Observed in:
    DISEASE ASSOCIATED WITH atoh7 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    persistent hyperplastic primary vitreous Persistent hyperplastic primary vitreous, autosomal recessive 221900
    DISEASE ASSOCIATED WITH atoh7 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process retina layer formation (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 18)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011598 (1)
  • InterPro:IPR032663 (1)
  • InterPro:IPR036638 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atoh7-201 (1) 1045
    ottdart00000001792 (1) 1024
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atoh7
    MARKER RELATIONSHIPS
    atoh7Contained in: [BAC] DKEY-51A16 (1) (order this), RP71-PACKTRZ (1) (order this)
    atoh7Encodes: [cDNA] MGC:86897 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131632 (1) 1031bp
    Genomic GenBank:BX530079 (1) 166397bp
    Select Tool
    Polypeptide UniProtKB:Q8AW52 (1) 134aa
    Sequence Clusters UniGene:82507 (1)
    Sequence Information (all 13)
    OTHER atoh7 GENE PAGES
  • Alliance (1)
  • Gene:58216 (1)
  • VEGA:OTTDARG00000001678 (1)
  • VEGA:OTTDARG00000018249 (1)
  • Ensembl(GRCz11):ENSDARG00000069552 (2)
  • ORTHOLOGY for atoh7 (Chr: 13)
    CITATIONS (151)