ZFIN ID: ZDB-GENE-000622-1
Gene Name: GATA binding protein 6
Gene Symbol: gata6
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: GATA-5, cb603 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 75 figures from 52 publications
Directly Submitted Expression Data: 6 figures (15 images) from Thisse et al., 2001 [cb603]
Wild-type Stages, Structures: Blastula:30%-epiboly (4.66h-5.25h) to Larval:Day 6 (144.0h-168.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa38163 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38164 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 6 figures from 5 publications
    Observed in:
    DISEASE ASSOCIATED WITH gata6 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    atrial heart septal defect 9 Atrial septal defect 9 614475
    atrioventricular septal defect Atrioventricular septal defect 5 614474
    double outlet right ventricle Persistent truncus arteriosus 217095
    tetralogy of Fallot Tetralogy of Fallot 187500
    Pancreatic agenesis and congenital heart defects 600001
    DISEASE ASSOCIATED WITH gata6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 20)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000679 (1)
  • InterPro:IPR008013 (1)
  • InterPro:IPR013088 (1)
  • InterPro:IPR016375 (1)
  • InterPro:IPR039355 (1)
  • PROSITE:PS00344 (1)
  • PROSITE:PS50114 (1)
  • Pfam:PF00320 (1)
  • Pfam:PF05349 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gata6-001 (1) 2427
    gata6-002 (1) 2054
    gata6-003 (1) 1797
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gata6
    MARKER RELATIONSHIPS
    gata6Contained in: [BAC] DKEY-2P18 (1) (order this)
    gata6Encodes: [EST] cb603 (1) (order this)
    [cDNA] MGC:85943 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131557 (1) 1789bp
    Genomic GenBank:BX842700 (1) 198258bp
    Select Tool
    Polypeptide UniProtKB:Q6NW63 (1) 501aa
    Sequence Clusters UniGene:78356 (1)
    Sequence Information (all 22)
    OTHER gata6 GENE PAGES
  • Alliance (1)
  • Gene:58076 (1)
  • VEGA:OTTDARG00000019101 (1)
  • Ensembl(GRCz11):ENSDARG00000103589 (1)
  • ORTHOLOGY for gata6 (Chr: 2)
    CITATIONS (121)