ZFIN ID: ZDB-GENE-000616-6
Gene Name: myogenic factor 5
Gene Symbol: myf5
Sequence Ontology ID : SO:0000704

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Previous Names: myf-5, cb641 (1), zgc:110509

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 86 figures from 52 publications
Directly Submitted Expression Data: 6 figures (25 images) from Thisse et al., 2001 [cb641]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Adult (90d-730d, breeding adult)
  adaxial cell, adductor hyohyoid, adductor mandibulae, adductor operculi (all 52) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hu2022 Point Mutation Unknown Premature Stop ENU
sa26293 Point Mutation Unknown Premature Stop ENU
Targeting reagents: MO1-myf5 (1), MO3-myf5 (1), MO4-myf5 (1), MO5-myf5 (1), MO6-myf5 (1)
PHENOTYPE
Data: 10 figures from 3 publications
Observed in: cephalic musculature, ceratobranchial cartilage, ceratohyal cartilage, chondroblast (all 20) expand
DISEASE ASSOCIATED WITH myf5 HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process muscle organ development (more)
Cellular Component nucleolus (more)
Molecular Function DNA binding (more)
GO Terms (all 21)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002546 (1)
  • InterPro:IPR011598 (1)
  • InterPro:IPR022032 (1)
  • InterPro:IPR036638 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • Pfam:PF01586 (1)
  • Pfam:PF12232 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA myf5-001 (1) 1415
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM myf5
    Tg(-2.4myf5:EGFP), Tg(-10.0myf5:EGFP), Tg(-80.0myf5:EGFP), Tg(AITR-0.3myf5:EGFP), Tg(AITR-3.0myf5:EGFP) (all 8) expand
    MARKER RELATIONSHIPS
    myf5Contained in: [BAC] CH211-91G3 (1) (order this)
    myf5Encodes: [EST] cb641 (1)
    [cDNA] MGC:110509 (1) (order this), MGC:192249 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131576 (1) 1433bp
    Genomic GenBank:BX537156 (1) 117987bp
    Select Tool
    Polypeptide UniProtKB:Q5CZP8 (1) 237aa
    Sequence Clusters UniGene:83041 (1)
    Sequence Information (all 25)
    OTHER myf5 GENE PAGES
  • Alliance (1)
  • Gene:58097 (1)
  • VEGA:OTTDARG00000008348 (1)
  • Ensembl(GRCz10):ENSDARG00000007277 (1)
  • ORTHOLOGY for myf5 (Chr: 4)
    CITATIONS (131)