header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-000616-3
Gene Name: caspase a
Gene Symbol: caspa
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: casp1 (1), caspy (1), fa93b02, wu:fa93b02 (1), zgc:109869

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits Pyrin domain binding activity and cysteine-type endopeptidase activity. Involved in embryonic viscerocranium morphogenesis; innate immune response; and positive regulation of apoptotic  ...
GENE EXPRESSION
All Expression Data: 5 figures from 3 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Day 4 (96.0h-120.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hdb11 Small Deletion Unknown Frameshift, Premature Stop CRISPR
hdb12 Insertion Exon 1 Premature Stop CRISPR
sa36229 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH caspa HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH caspa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of apoptotic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function cysteine-type endopeptidase activity (more)
    GO Terms (all 15)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA caspa-201 (1) 1542
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM caspa No data available
    MARKER RELATIONSHIPS
    caspa Contained in: [BAC] CH211-225P5 (1) (order this)
    caspa Encodes: [EST] fa93b02 (1)
    [cDNA] MGC:109869 (1) (order this), MGC:191955 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131505 (1) 1533 bp
    Genomic GenBank:BX649388 (1) 177865 bp
    Select Tool
    Polypeptide UniProtKB:A0A2U9DQN4 (1) 383 aa
    Sequence Clusters UniGene:76374 (1)
    Sequence Information (all 22)
    ORTHOLOGY for caspa ( Chr: 16 )
    CITATIONS (40)